Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 AC010536.3-201ENST00000620306 533 ntBASIC16.91■□□□□ 0.3
CCDC107Q8WV48 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 AC079598.2-202ENST00000546624 1451 ntBASIC16.91■□□□□ 0.3
CCDC107Q8WV48 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 HTR7P1-202ENST00000624664 4411 ntBASIC16.91■□□□□ 0.3
CCDC107Q8WV48 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC107Q8WV48 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.9■□□□□ 0.3
CCDC107Q8WV48 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 AL138781.2-201ENST00000617896 1843 ntBASIC16.9■□□□□ 0.3
CCDC107Q8WV48 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC107Q8WV48 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC107Q8WV48 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 AL691432.2-201ENST00000607222 2038 ntBASIC16.89■□□□□ 0.29
CCDC107Q8WV48 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.89■□□□□ 0.29
CCDC107Q8WV48 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 AL591742.1-201ENST00000604433 565 ntBASIC16.89■□□□□ 0.29
CCDC107Q8WV48 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC107Q8WV48 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms