Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 CR392000.1-201ENST00000624770 1228 ntBASIC27.29■■□□□ 1.96
TMC1Q8TDI8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 PHGDH-210ENST00000641115 1638 ntBASIC27.29■■□□□ 1.96
TMC1Q8TDI8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TMC1Q8TDI8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 AL353708.3-201ENST00000610272 989 ntBASIC27.28■■□□□ 1.96
TMC1Q8TDI8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TMC1Q8TDI8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 AC087499.1-201ENST00000418141 1075 ntBASIC27.27■■□□□ 1.96
TMC1Q8TDI8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC27.27■■□□□ 1.96
TMC1Q8TDI8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
TMC1Q8TDI8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 AC133561.5-201ENST00000635547 218 ntBASIC27.26■■□□□ 1.95
TMC1Q8TDI8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TMC1Q8TDI8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 NIFKP9-201ENST00000419265 221 ntBASIC27.25■■□□□ 1.95
TMC1Q8TDI8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.25■■□□□ 1.95
TMC1Q8TDI8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TMC1Q8TDI8 NUDT16P1-203ENST00000513809 620 ntBASIC27.24■■□□□ 1.95
TMC1Q8TDI8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms