Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CCDC148Q8NFR7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC148Q8NFR7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC148Q8NFR7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.58■■□□□ 1.2
CCDC148Q8NFR7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC148Q8NFR7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC148Q8NFR7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.58■■□□□ 1.2
CCDC148Q8NFR7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.2
CCDC148Q8NFR7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PRORSD1P-201ENST00000295112 541 ntBASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 C1QBPP2-201ENST00000528754 825 ntBASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC148Q8NFR7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC148Q8NFR7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 KRT18P16-201ENST00000510337 1294 ntBASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 AC004264.1-201ENST00000608354 794 ntBASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC148Q8NFR7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 RPPH1-201ENST00000516869 333 ntBASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 AC110285.5-201ENST00000611501 352 ntBASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC148Q8NFR7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms