Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.45■□□□□ 0.54
SIMC1Q8NDZ2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 AC009237.14-201ENST00000609975 1594 ntBASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 AC233263.1-201ENST00000578059 224 ntBASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.44■□□□□ 0.54
SIMC1Q8NDZ2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 AC116351.2-201ENST00000606540 1585 ntBASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 AC018445.3-201ENST00000624177 1945 ntBASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
SIMC1Q8NDZ2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SIMC1Q8NDZ2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 AP003097.1-201ENST00000530657 1135 ntBASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 TFP1-202ENST00000475455 1573 ntBASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms