Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 FAM220CP-201ENST00000395253 831 ntBASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC168Q8NDH2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 AL645929.1-201ENST00000420084 975 ntBASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 AC092329.2-201ENST00000598402 547 ntBASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 KRT8P20-201ENST00000423953 1409 ntBASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC168Q8NDH2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 LINC02084-201ENST00000606069 1096 ntBASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 BX640515.1-201ENST00000617215 977 ntBASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 BX119927.1-201ENST00000636596 1552 ntBASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 TFP1-202ENST00000475455 1573 ntBASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 AL355385.1-201ENST00000606123 409 ntBASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 AL031008.1-201ENST00000619963 541 ntBASIC16.38■□□□□ 0.21
CCDC168Q8NDH2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 GCSHP2-201ENST00000560971 527 ntBASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 AL121603.2-201ENST00000557373 2117 ntBASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC168Q8NDH2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms