Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LSMEM1Q8N8F7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LSMEM1Q8N8F7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LSMEM1Q8N8F7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 Z82202.1-201ENST00000623446 1880 ntBASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 AC060766.5-201ENST00000590539 871 ntBASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 AC092368.3-202ENST00000574180 1591 ntBASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LSMEM1Q8N8F7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 AL109923.1-201ENST00000618799 583 ntBASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 AC006557.6-201ENST00000623071 864 ntBASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
LSMEM1Q8N8F7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.89■□□□□ 0.46
LSMEM1Q8N8F7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms