Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA6Q8N139 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA6Q8N139 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC29.18■■■□□ 2.26
ABCA6Q8N139 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA6Q8N139 AL031432.5-201ENST00000641059 760 ntBASIC29.18■■■□□ 2.26
ABCA6Q8N139 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA6Q8N139 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
ABCA6Q8N139 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA6Q8N139 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA6Q8N139 Telomerase-vert.1-201ENST00000363312 438 ntBASIC29.17■■■□□ 2.26
ABCA6Q8N139 CKBP1-201ENST00000565489 1086 ntBASIC29.17■■■□□ 2.26
ABCA6Q8N139 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC29.17■■■□□ 2.26
ABCA6Q8N139 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA6Q8N139 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA6Q8N139 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA6Q8N139 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA6Q8N139 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
ABCA6Q8N139 KRT8P41-201ENST00000533985 1514 ntBASIC29.17■■■□□ 2.26
ABCA6Q8N139 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
ABCA6Q8N139 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.16■■■□□ 2.26
ABCA6Q8N139 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.16■■■□□ 2.26
ABCA6Q8N139 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.16■■■□□ 2.26
ABCA6Q8N139 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA6Q8N139 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA6Q8N139 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
ABCA6Q8N139 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA6Q8N139 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA6Q8N139 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA6Q8N139 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ABCA6Q8N139 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.15■■■□□ 2.26
ABCA6Q8N139 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
ABCA6Q8N139 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC29.15■■■□□ 2.26
ABCA6Q8N139 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
ABCA6Q8N139 AP000523.1-201ENST00000398242 1049 ntBASIC29.15■■■□□ 2.26
ABCA6Q8N139 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 AP000347.1-202ENST00000435868 847 ntBASIC29.15■■■□□ 2.26
ABCA6Q8N139 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC29.15■■■□□ 2.26
ABCA6Q8N139 NEK4P2-201ENST00000580004 1012 ntBASIC29.15■■■□□ 2.26
ABCA6Q8N139 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
ABCA6Q8N139 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC29.15■■■□□ 2.26
ABCA6Q8N139 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
ABCA6Q8N139 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC29.14■■■□□ 2.26
ABCA6Q8N139 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ABCA6Q8N139 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ABCA6Q8N139 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ABCA6Q8N139 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.14■■■□□ 2.26
ABCA6Q8N139 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC29.14■■■□□ 2.26
ABCA6Q8N139 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC29.14■■■□□ 2.26
ABCA6Q8N139 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ABCA6Q8N139 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC29.14■■■□□ 2.26
ABCA6Q8N139 ERF-202ENST00000440177 2032 ntTSL 2 BASIC29.14■■■□□ 2.25
ABCA6Q8N139 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC29.14■■■□□ 2.25
ABCA6Q8N139 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ABCA6Q8N139 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
ABCA6Q8N139 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 FDX1P1-201ENST00000449115 551 ntBASIC29.13■■■□□ 2.25
ABCA6Q8N139 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA6Q8N139 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA6Q8N139 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA6Q8N139 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA6Q8N139 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC29.13■■■□□ 2.25
ABCA6Q8N139 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
ABCA6Q8N139 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ABCA6Q8N139 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 BCL10-202ENST00000620248 774 ntTSL 5 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ABCA6Q8N139 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
ABCA6Q8N139 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.11■■■□□ 2.25
ABCA6Q8N139 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.11■■■□□ 2.25
ABCA6Q8N139 LINC01311-201ENST00000565162 1445 ntBASIC29.11■■■□□ 2.25
ABCA6Q8N139 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA6Q8N139 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA6Q8N139 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA6Q8N139 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA6Q8N139 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
ABCA6Q8N139 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ABCA6Q8N139 AL160286.2-201ENST00000567150 934 ntBASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms