Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 AC026271.3-201ENST00000571884 352 ntBASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 AP000525.1-201ENST00000608286 694 ntBASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCDC60Q8IWA6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 UNC93B2-201ENST00000285383 730 ntBASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 AC133561.5-201ENST00000635547 218 ntBASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 KRT8P9-201ENST00000558927 1449 ntBASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC60Q8IWA6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 B3GAT3P1-201ENST00000471720 806 ntBASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 AC011506.1-201ENST00000474329 610 ntBASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 MIR6786-201ENST00000616843 113 ntBASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC60Q8IWA6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 LINC01521-201ENST00000504184 1943 ntBASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 PKD1P6-201ENST00000343738 4769 ntBASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 MMP23A-201ENST00000234610 1017 ntBASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 AL390955.1-201ENST00000428694 934 ntBASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 LINC01023-201ENST00000606054 436 ntBASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC60Q8IWA6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms