Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.3■■□□□ 1
CBWD2Q8IUF1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.3■■□□□ 1
CBWD2Q8IUF1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.3■■□□□ 1
CBWD2Q8IUF1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.3■■□□□ 1
CBWD2Q8IUF1 TMEM191A-211ENST00000637163 1067 ntBASIC21.3■■□□□ 1
CBWD2Q8IUF1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CBWD2Q8IUF1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.3■■□□□ 1
CBWD2Q8IUF1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.3■■□□□ 1
CBWD2Q8IUF1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 GCSHP5-201ENST00000443090 522 ntBASIC21.29■■□□□ 1
CBWD2Q8IUF1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CBWD2Q8IUF1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CBWD2Q8IUF1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AC110285.5-201ENST00000611501 352 ntBASIC21.28■■□□□ 1
CBWD2Q8IUF1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
CBWD2Q8IUF1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CBWD2Q8IUF1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.27■■□□□ 1
CBWD2Q8IUF1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CBWD2Q8IUF1 AC142381.4-202ENST00000563973 229 ntBASIC21.27■■□□□ 1
CBWD2Q8IUF1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CBWD2Q8IUF1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.27■■□□□ 1
CBWD2Q8IUF1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.27■■□□□ 1
CBWD2Q8IUF1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CBWD2Q8IUF1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.27■■□□□ 1
CBWD2Q8IUF1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CBWD2Q8IUF1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 TUBB8P6-201ENST00000436895 1288 ntBASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 AL158047.1-201ENST00000445918 881 ntBASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.26■□□□□ 0.99
CBWD2Q8IUF1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms