Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC12.92□□□□□ -0.34
SCXQ7RTU7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SCXQ7RTU7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SCXQ7RTU7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 POM121L13P-201ENST00000422362 380 ntBASIC12.91□□□□□ -0.34
SCXQ7RTU7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.91□□□□□ -0.34
SCXQ7RTU7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SCXQ7RTU7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 MIR718-201ENST00000390190 70 ntBASIC12.9□□□□□ -0.34
SCXQ7RTU7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 RN7SL471P-201ENST00000580476 299 ntBASIC12.9□□□□□ -0.34
SCXQ7RTU7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.9□□□□□ -0.34
SCXQ7RTU7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 AL356652.1-201ENST00000615962 565 ntBASIC12.9□□□□□ -0.34
SCXQ7RTU7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SCXQ7RTU7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.9□□□□□ -0.34
SCXQ7RTU7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SCXQ7RTU7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SCXQ7RTU7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SCXQ7RTU7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms