Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 RARRES2P4-201ENST00000514074 484 ntBASIC17.68■□□□□ 0.42
SHFQ7M4L6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 LINC01465-201ENST00000408887 1940 ntBASIC17.68■□□□□ 0.42
SHFQ7M4L6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHFQ7M4L6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SHFQ7M4L6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 AC007613.1-201ENST00000572811 2597 ntBASIC17.67■□□□□ 0.42
SHFQ7M4L6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.67■□□□□ 0.42
SHFQ7M4L6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHFQ7M4L6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHFQ7M4L6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 KRT16P6-202ENST00000425692 1426 ntBASIC17.66■□□□□ 0.42
SHFQ7M4L6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 AC087623.3-201ENST00000607047 1098 ntBASIC17.66■□□□□ 0.42
SHFQ7M4L6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SHFQ7M4L6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHFQ7M4L6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHFQ7M4L6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHFQ7M4L6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHFQ7M4L6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.65■□□□□ 0.42
SHFQ7M4L6 MFSD11-216ENST00000590393 1141 ntBASIC17.65■□□□□ 0.42
SHFQ7M4L6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHFQ7M4L6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHFQ7M4L6 AL031963.3-201ENST00000606441 850 ntBASIC17.65■□□□□ 0.42
SHFQ7M4L6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHFQ7M4L6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHFQ7M4L6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
SHFQ7M4L6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.64■□□□□ 0.42
SHFQ7M4L6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SHFQ7M4L6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHFQ7M4L6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms