Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC007228.2-201ENST00000602145 1328 ntBASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC007618.1-201ENST00000366455 732 ntBASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 PGM5P4-201ENST00000421970 445 ntBASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3CPQ6ZMV5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 KRT8P36-201ENST00000489121 1440 ntBASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 MIR4651-201ENST00000582622 73 ntBASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC073130.3-201ENST00000624389 2278 ntBASIC22.41■■□□□ 1.18
PPP4R3CPQ6ZMV5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AL162377.1-201ENST00000618844 1793 ntBASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 MTND2P2-201ENST00000434633 945 ntBASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC110760.3-202ENST00000515177 371 ntBASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 RNA5SP413-201ENST00000516373 109 ntBASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC084824.3-201ENST00000620472 856 ntBASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.4■■□□□ 1.18
PPP4R3CPQ6ZMV5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PPP4R3CPQ6ZMV5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PPP4R3CPQ6ZMV5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 SNORA72.3-201ENST00000365074 132 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 BTBD7P2-201ENST00000441962 620 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 AP000547.1-201ENST00000454360 617 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 MTND6P32-201ENST00000457611 483 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 VN1R87P-201ENST00000596706 487 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 AC026979.4-201ENST00000606555 645 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 AL356652.1-201ENST00000615962 565 ntBASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.39■■□□□ 1.17
PPP4R3CPQ6ZMV5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms