Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 AC098818.2-201ENST00000564925 2320 ntBASIC20.54■□□□□ 0.88
RNF43Q68DV7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF43Q68DV7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF43Q68DV7 KRT17P2-201ENST00000300992 1314 ntBASIC20.53■□□□□ 0.88
RNF43Q68DV7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF43Q68DV7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF43Q68DV7 KRT8P20-201ENST00000423953 1409 ntBASIC20.53■□□□□ 0.88
RNF43Q68DV7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF43Q68DV7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF43Q68DV7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RNF43Q68DV7 KRT8P17-201ENST00000453110 1448 ntBASIC20.52■□□□□ 0.87
RNF43Q68DV7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF43Q68DV7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
RNF43Q68DV7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 HLA-G-202ENST00000376815 851 ntBASIC20.51■□□□□ 0.87
RNF43Q68DV7 HLA-G-203ENST00000376818 1127 ntBASIC20.51■□□□□ 0.87
RNF43Q68DV7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF43Q68DV7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF43Q68DV7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RNF43Q68DV7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF43Q68DV7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 AC012618.2-201ENST00000428058 849 ntBASIC20.5■□□□□ 0.87
RNF43Q68DV7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF43Q68DV7 AC133561.5-201ENST00000635547 218 ntBASIC20.5■□□□□ 0.87
RNF43Q68DV7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RNF43Q68DV7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
RNF43Q68DV7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF43Q68DV7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 AC116562.4-201ENST00000641316 2276 ntBASIC20.5■□□□□ 0.87
RNF43Q68DV7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF43Q68DV7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms