Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AL023803.3-201ENST00000615559 522 ntBASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 KRT8P41-201ENST00000533985 1514 ntBASIC30.38■■■□□ 2.45
CCDC18Q5T9S5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 CA15P1-201ENST00000481698 905 ntBASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC18Q5T9S5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 FAM8A6P-201ENST00000407496 1135 ntBASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 AP005212.1-201ENST00000581547 1997 ntBASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC18Q5T9S5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 AK4P3-201ENST00000418260 669 ntBASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC30.35■■■□□ 2.45
CCDC18Q5T9S5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC18Q5T9S5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC18Q5T9S5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 AC009237.14-201ENST00000609975 1594 ntBASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC30.32■■■□□ 2.44
CCDC18Q5T9S5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 BX664615.1-201ENST00000443558 458 ntBASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 AC087388.1-201ENST00000571370 1112 ntBASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 AC073314.1-201ENST00000568729 2216 ntBASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 TSPY17P-201ENST00000450329 467 ntBASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 YBX1P2-201ENST00000489612 999 ntBASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CCDC18Q5T9S5 CKBP1-201ENST00000565489 1086 ntBASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms