Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 AL139424.1-201ENST00000607572 797 ntBASIC17.07■□□□□ 0.32
LRRK2Q5S007 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 AC112907.2-201ENST00000448639 330 ntBASIC17.07■□□□□ 0.32
LRRK2Q5S007 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 TFP1-202ENST00000475455 1573 ntBASIC17.07■□□□□ 0.32
LRRK2Q5S007 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRK2Q5S007 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRK2Q5S007 KRT8P20-201ENST00000423953 1409 ntBASIC17.06■□□□□ 0.32
LRRK2Q5S007 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRK2Q5S007 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 AC091304.2-201ENST00000564639 760 ntBASIC17.06■□□□□ 0.32
LRRK2Q5S007 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRK2Q5S007 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRK2Q5S007 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRK2Q5S007 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
LRRK2Q5S007 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRK2Q5S007 KRT8P8-201ENST00000434750 1448 ntBASIC17.06■□□□□ 0.32
LRRK2Q5S007 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 AC116351.2-201ENST00000606540 1585 ntBASIC17.05■□□□□ 0.32
LRRK2Q5S007 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRK2Q5S007 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRK2Q5S007 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 AL590627.1-203ENST00000421194 1026 ntBASIC17.04■□□□□ 0.32
LRRK2Q5S007 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 HLA-A-209ENST00000638375 975 ntBASIC17.04■□□□□ 0.32
LRRK2Q5S007 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 AL162741.1-201ENST00000565563 1558 ntBASIC17.04■□□□□ 0.32
LRRK2Q5S007 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRK2Q5S007 BX276092.5-203ENST00000456199 560 ntBASIC17.04■□□□□ 0.32
LRRK2Q5S007 AC079776.4-201ENST00000511039 504 ntBASIC17.04■□□□□ 0.32
LRRK2Q5S007 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRK2Q5S007 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms