Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RSPO4Q2I0M5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 AC079781.3-201ENST00000449110 356 ntBASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 TSSC2-201ENST00000450217 709 ntBASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RSPO4Q2I0M5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.02■□□□□ 0.64
RSPO4Q2I0M5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RSPO4Q2I0M5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RSPO4Q2I0M5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RSPO4Q2I0M5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.02■□□□□ 0.63
RSPO4Q2I0M5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 LINC00565-201ENST00000562710 2331 ntBASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 NUS1P1-201ENST00000446295 882 ntBASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 MIR3180-1-201ENST00000580374 94 ntBASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 MIR3180-3-201ENST00000584616 94 ntBASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 AC079834.2-201ENST00000609776 1949 ntBASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RSPO4Q2I0M5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 KRT8P20-201ENST00000423953 1409 ntBASIC19■□□□□ 0.63
RSPO4Q2I0M5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 AC120114.3-201ENST00000611923 658 ntBASIC19■□□□□ 0.63
RSPO4Q2I0M5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19■□□□□ 0.63
RSPO4Q2I0M5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO4Q2I0M5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 AL645929.1-201ENST00000420084 975 ntBASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 SPDYE13P-201ENST00000445314 798 ntBASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 AL732292.2-201ENST00000609649 430 ntBASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO4Q2I0M5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms