Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDS5AQ29RF7 TCF3P1-201ENST00000423021 1937 ntBASIC23.54■■□□□ 1.36
PDS5AQ29RF7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDS5AQ29RF7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 LINC01568-207ENST00000641790 1380 ntBASIC23.53■■□□□ 1.36
PDS5AQ29RF7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 AC092667.1-201ENST00000434301 2586 ntBASIC23.53■■□□□ 1.36
PDS5AQ29RF7 TSPY14P-201ENST00000303979 915 ntBASIC23.53■■□□□ 1.36
PDS5AQ29RF7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 AC091390.4-202ENST00000476426 537 ntBASIC23.53■■□□□ 1.36
PDS5AQ29RF7 AC097488.1-201ENST00000507834 756 ntBASIC23.53■■□□□ 1.36
PDS5AQ29RF7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.53■■□□□ 1.36
PDS5AQ29RF7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PDS5AQ29RF7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 KRT18P22-201ENST00000402024 1347 ntBASIC23.51■■□□□ 1.35
PDS5AQ29RF7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 FAM207BP-201ENST00000447172 505 ntBASIC23.51■■□□□ 1.35
PDS5AQ29RF7 EGLN1P1-201ENST00000531623 762 ntBASIC23.51■■□□□ 1.35
PDS5AQ29RF7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 C2orf69P3-201ENST00000565542 1120 ntBASIC23.51■■□□□ 1.35
PDS5AQ29RF7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.51■■□□□ 1.35
PDS5AQ29RF7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 AC113347.1-201ENST00000413321 391 ntBASIC23.5■■□□□ 1.35
PDS5AQ29RF7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.5■■□□□ 1.35
PDS5AQ29RF7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.49■■□□□ 1.35
PDS5AQ29RF7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms