Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.14■□□□□ 0.65
CACNA1EQ15878 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1EQ15878 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1EQ15878 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1EQ15878 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1EQ15878 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1EQ15878 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1EQ15878 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.13■□□□□ 0.65
CACNA1EQ15878 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1EQ15878 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CACNA1EQ15878 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 SMG8-203ENST00000578922 2178 ntBASIC19.12■□□□□ 0.65
CACNA1EQ15878 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 TMEM179-206ENST00000616017 1645 ntBASIC19.12■□□□□ 0.65
CACNA1EQ15878 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1EQ15878 AC141257.4-201ENST00000634557 245 ntBASIC19.12■□□□□ 0.65
CACNA1EQ15878 AC136944.6-201ENST00000634818 245 ntBASIC19.12■□□□□ 0.65
CACNA1EQ15878 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1EQ15878 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 AC069148.1-201ENST00000608741 768 ntBASIC19.11■□□□□ 0.65
CACNA1EQ15878 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1EQ15878 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 FAM86EP-206ENST00000510506 987 ntBASIC19.11■□□□□ 0.65
CACNA1EQ15878 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1EQ15878 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 AL512604.3-201ENST00000569583 964 ntBASIC19.1■□□□□ 0.65
CACNA1EQ15878 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1EQ15878 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CACNA1EQ15878 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA1EQ15878 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CACNA1EQ15878 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1EQ15878 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms