Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSM6P62312 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM6P62312 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSM6P62312 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM6P62312 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
LSM6P62312 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LSM6P62312 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LSM6P62312 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.2■□□□□ 0.34
LSM6P62312 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM6P62312 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LSM6P62312 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 UNC93B4-201ENST00000505679 747 ntBASIC17.2■□□□□ 0.34
LSM6P62312 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.2■□□□□ 0.34
LSM6P62312 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM6P62312 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.2■□□□□ 0.34
LSM6P62312 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM6P62312 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
LSM6P62312 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 AP006587.1-201ENST00000534129 1502 ntBASIC17.2■□□□□ 0.34
LSM6P62312 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LSM6P62312 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.2■□□□□ 0.34
LSM6P62312 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.2■□□□□ 0.34
LSM6P62312 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LSM6P62312 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSM6P62312 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LSM6P62312 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LSM6P62312 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
LSM6P62312 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM6P62312 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.19■□□□□ 0.34
LSM6P62312 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.19■□□□□ 0.34
LSM6P62312 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LSM6P62312 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSM6P62312 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.19■□□□□ 0.34
LSM6P62312 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.19■□□□□ 0.34
LSM6P62312 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 YBX1P10-201ENST00000444752 975 ntBASIC17.19■□□□□ 0.34
LSM6P62312 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LSM6P62312 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LSM6P62312 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSM6P62312 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.19■□□□□ 0.34
LSM6P62312 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM6P62312 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LSM6P62312 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.18■□□□□ 0.34
LSM6P62312 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM6P62312 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.18■□□□□ 0.34
LSM6P62312 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.18■□□□□ 0.34
LSM6P62312 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM6P62312 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
LSM6P62312 UNC93B5-201ENST00000530315 699 ntBASIC17.18■□□□□ 0.34
LSM6P62312 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LSM6P62312 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LSM6P62312 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.18■□□□□ 0.34
LSM6P62312 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.18■□□□□ 0.34
LSM6P62312 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSM6P62312 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM6P62312 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms