Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.39■□□□□ 0.69
LIMK1P53667 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.39■□□□□ 0.69
LIMK1P53667 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LIMK1P53667 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LIMK1P53667 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK1P53667 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LIMK1P53667 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LIMK1P53667 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 HOMER2P1-201ENST00000455653 964 ntBASIC19.38■□□□□ 0.69
LIMK1P53667 AC011506.1-201ENST00000474329 610 ntBASIC19.38■□□□□ 0.69
LIMK1P53667 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK1P53667 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK1P53667 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK1P53667 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LIMK1P53667 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.38■□□□□ 0.69
LIMK1P53667 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK1P53667 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.38■□□□□ 0.69
LIMK1P53667 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LIMK1P53667 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.37■□□□□ 0.69
LIMK1P53667 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.37■□□□□ 0.69
LIMK1P53667 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.37■□□□□ 0.69
LIMK1P53667 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
LIMK1P53667 AC010653.2-201ENST00000623505 997 ntBASIC19.37■□□□□ 0.69
LIMK1P53667 AL031432.5-201ENST00000641059 760 ntBASIC19.37■□□□□ 0.69
LIMK1P53667 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK1P53667 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LIMK1P53667 CCR12P-201ENST00000446203 998 ntBASIC19.36■□□□□ 0.69
LIMK1P53667 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.36■□□□□ 0.69
LIMK1P53667 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 AC116407.4-201ENST00000623319 1061 ntBASIC19.36■□□□□ 0.69
LIMK1P53667 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
LIMK1P53667 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.36■□□□□ 0.69
LIMK1P53667 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK1P53667 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.35■□□□□ 0.69
LIMK1P53667 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LIMK1P53667 AC007952.6-201ENST00000573168 2673 ntBASIC19.35■□□□□ 0.69
LIMK1P53667 AC003957.1-201ENST00000625108 2673 ntBASIC19.35■□□□□ 0.69
LIMK1P53667 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.35■□□□□ 0.69
LIMK1P53667 HLA-G-202ENST00000376815 851 ntBASIC19.35■□□□□ 0.69
LIMK1P53667 HLA-G-203ENST00000376818 1127 ntBASIC19.35■□□□□ 0.69
LIMK1P53667 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.35■□□□□ 0.69
LIMK1P53667 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LIMK1P53667 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.35■□□□□ 0.69
LIMK1P53667 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK1P53667 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.35■□□□□ 0.69
LIMK1P53667 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LIMK1P53667 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.34■□□□□ 0.69
LIMK1P53667 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK1P53667 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK1P53667 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK1P53667 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK1P53667 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LIMK1P53667 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK1P53667 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LIMK1P53667 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK1P53667 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LIMK1P53667 AC004980.1-204ENST00000429707 299 ntBASIC19.34■□□□□ 0.69
LIMK1P53667 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LIMK1P53667 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.34■□□□□ 0.69
LIMK1P53667 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.34■□□□□ 0.69
LIMK1P53667 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.34■□□□□ 0.69
LIMK1P53667 AP000692.2-201ENST00000608391 879 ntBASIC19.34■□□□□ 0.69
LIMK1P53667 AC069148.1-201ENST00000608741 768 ntBASIC19.34■□□□□ 0.69
LIMK1P53667 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms