Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC34.84■■■■□ 3.17
NCAPD3P42695 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
NCAPD3P42695 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
NCAPD3P42695 KRT8P8-201ENST00000434750 1448 ntBASIC34.84■■■■□ 3.17
NCAPD3P42695 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
NCAPD3P42695 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
NCAPD3P42695 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
NCAPD3P42695 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC34.84■■■■□ 3.17
NCAPD3P42695 IFNL4P1-201ENST00000607083 540 ntBASIC34.84■■■■□ 3.17
NCAPD3P42695 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
NCAPD3P42695 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
NCAPD3P42695 AL049796.1-201ENST00000565336 1766 ntBASIC34.83■■■■□ 3.17
NCAPD3P42695 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC34.83■■■■□ 3.17
NCAPD3P42695 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
NCAPD3P42695 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC34.83■■■■□ 3.17
NCAPD3P42695 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
NCAPD3P42695 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
NCAPD3P42695 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC34.83■■■■□ 3.17
NCAPD3P42695 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
NCAPD3P42695 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
NCAPD3P42695 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC34.83■■■■□ 3.17
NCAPD3P42695 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC34.83■■■■□ 3.17
NCAPD3P42695 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC34.83■■■■□ 3.17
NCAPD3P42695 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC34.83■■■■□ 3.17
NCAPD3P42695 AL160286.2-201ENST00000567150 934 ntBASIC34.83■■■■□ 3.17
NCAPD3P42695 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
NCAPD3P42695 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC34.82■■■■□ 3.16
NCAPD3P42695 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC34.82■■■■□ 3.16
NCAPD3P42695 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC34.82■■■■□ 3.16
NCAPD3P42695 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
NCAPD3P42695 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
NCAPD3P42695 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
NCAPD3P42695 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
NCAPD3P42695 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
NCAPD3P42695 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
NCAPD3P42695 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
NCAPD3P42695 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
NCAPD3P42695 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
NCAPD3P42695 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC34.8■■■■□ 3.16
NCAPD3P42695 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
NCAPD3P42695 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
NCAPD3P42695 KRT18P1-202ENST00000452408 1331 ntBASIC34.8■■■■□ 3.16
NCAPD3P42695 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
NCAPD3P42695 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
NCAPD3P42695 TSSC2-201ENST00000450217 709 ntBASIC34.8■■■■□ 3.16
NCAPD3P42695 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC34.8■■■■□ 3.16
NCAPD3P42695 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC34.8■■■■□ 3.16
NCAPD3P42695 AC016734.2-201ENST00000624325 1377 ntBASIC34.79■■■■□ 3.16
NCAPD3P42695 PPIH-202ENST00000372549 327 ntTSL 3 BASIC34.79■■■■□ 3.16
NCAPD3P42695 AC106795.1-205ENST00000512851 1056 ntBASIC34.79■■■■□ 3.16
NCAPD3P42695 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC34.79■■■■□ 3.16
NCAPD3P42695 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC34.79■■■■□ 3.16
NCAPD3P42695 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC34.79■■■■□ 3.16
NCAPD3P42695 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
NCAPD3P42695 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC34.79■■■■□ 3.16
NCAPD3P42695 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
NCAPD3P42695 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC34.79■■■■□ 3.16
NCAPD3P42695 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC34.79■■■■□ 3.16
NCAPD3P42695 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC34.79■■■■□ 3.16
NCAPD3P42695 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
NCAPD3P42695 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC34.78■■■■□ 3.16
NCAPD3P42695 DPP3P2-201ENST00000416030 1696 ntBASIC34.78■■■■□ 3.16
NCAPD3P42695 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
NCAPD3P42695 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
NCAPD3P42695 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC34.78■■■■□ 3.16
NCAPD3P42695 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
NCAPD3P42695 ILF2-202ENST00000368681 726 ntTSL 2 BASIC34.78■■■■□ 3.16
NCAPD3P42695 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC34.78■■■■□ 3.16
NCAPD3P42695 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
NCAPD3P42695 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
NCAPD3P42695 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
NCAPD3P42695 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC34.77■■■■□ 3.16
NCAPD3P42695 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
NCAPD3P42695 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC34.77■■■■□ 3.16
NCAPD3P42695 NUS1P1-201ENST00000446295 882 ntBASIC34.77■■■■□ 3.16
NCAPD3P42695 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC34.77■■■■□ 3.16
NCAPD3P42695 AL671883.3-201ENST00000603274 991 ntBASIC34.77■■■■□ 3.16
NCAPD3P42695 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
NCAPD3P42695 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
NCAPD3P42695 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC34.76■■■■□ 3.16
NCAPD3P42695 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
NCAPD3P42695 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
NCAPD3P42695 ME2-208ENST00000638937 2471 ntTSL 5 BASIC34.76■■■■□ 3.16
NCAPD3P42695 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.15
NCAPD3P42695 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC34.76■■■■□ 3.15
NCAPD3P42695 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
NCAPD3P42695 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC34.76■■■■□ 3.15
NCAPD3P42695 NME1-207ENST00000480143 964 ntTSL 2 BASIC34.76■■■■□ 3.15
NCAPD3P42695 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC34.76■■■■□ 3.15
NCAPD3P42695 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
NCAPD3P42695 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
NCAPD3P42695 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
NCAPD3P42695 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
NCAPD3P42695 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
NCAPD3P42695 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC34.75■■■■□ 3.15
NCAPD3P42695 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC34.75■■■■□ 3.15
NCAPD3P42695 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC34.75■■■■□ 3.15
NCAPD3P42695 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC34.75■■■■□ 3.15
NCAPD3P42695 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC34.75■■■■□ 3.15
NCAPD3P42695 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC34.75■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms