Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
COL15A1P39059 LINC01238-205ENST00000567549 1107 ntBASIC24.91■■□□□ 1.58
COL15A1P39059 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.91■■□□□ 1.58
COL15A1P39059 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 AC073314.1-201ENST00000568729 2216 ntBASIC24.9■■□□□ 1.58
COL15A1P39059 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
COL15A1P39059 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL15A1P39059 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.9■■□□□ 1.58
COL15A1P39059 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.9■■□□□ 1.58
COL15A1P39059 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
COL15A1P39059 AC116562.4-202ENST00000641738 218 ntBASIC24.9■■□□□ 1.58
COL15A1P39059 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL15A1P39059 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.89■■□□□ 1.57
COL15A1P39059 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL15A1P39059 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL15A1P39059 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.89■■□□□ 1.57
COL15A1P39059 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
COL15A1P39059 UPK3BP1-201ENST00000428678 509 ntBASIC24.89■■□□□ 1.57
COL15A1P39059 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.89■■□□□ 1.57
COL15A1P39059 Z85996.1-201ENST00000494644 937 ntBASIC24.89■■□□□ 1.57
COL15A1P39059 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL15A1P39059 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL15A1P39059 BX119927.1-201ENST00000636596 1552 ntBASIC24.88■■□□□ 1.57
COL15A1P39059 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 GABARAPL3-202ENST00000624044 1851 ntBASIC24.88■■□□□ 1.57
COL15A1P39059 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 CCR12P-201ENST00000446203 998 ntBASIC24.88■■□□□ 1.57
COL15A1P39059 AC091390.4-202ENST00000476426 537 ntBASIC24.88■■□□□ 1.57
COL15A1P39059 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.88■■□□□ 1.57
COL15A1P39059 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 AC139887.4-201ENST00000607877 719 ntBASIC24.88■■□□□ 1.57
COL15A1P39059 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 AL162377.1-201ENST00000618844 1793 ntBASIC24.88■■□□□ 1.57
COL15A1P39059 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL15A1P39059 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.88■■□□□ 1.57
COL15A1P39059 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.87■■□□□ 1.57
COL15A1P39059 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.87■■□□□ 1.57
COL15A1P39059 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL15A1P39059 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL15A1P39059 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
COL15A1P39059 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 YBX1P2-201ENST00000489612 999 ntBASIC24.87■■□□□ 1.57
COL15A1P39059 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.87■■□□□ 1.57
COL15A1P39059 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.87■■□□□ 1.57
COL15A1P39059 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
COL15A1P39059 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.87■■□□□ 1.57
COL15A1P39059 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
COL15A1P39059 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.87■■□□□ 1.57
COL15A1P39059 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL15A1P39059 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
COL15A1P39059 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL15A1P39059 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL15A1P39059 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
COL15A1P39059 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
COL15A1P39059 TMEM179-206ENST00000616017 1645 ntBASIC24.86■■□□□ 1.57
COL15A1P39059 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
COL15A1P39059 SLC25A1P2-201ENST00000430693 912 ntBASIC24.86■■□□□ 1.57
COL15A1P39059 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.86■■□□□ 1.57
COL15A1P39059 AC007663.1-201ENST00000438948 1240 ntBASIC24.86■■□□□ 1.57
COL15A1P39059 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
COL15A1P39059 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.86■■□□□ 1.57
COL15A1P39059 AC091076.1-201ENST00000610741 619 ntBASIC24.86■■□□□ 1.57
COL15A1P39059 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.86■■□□□ 1.57
COL15A1P39059 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL15A1P39059 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL15A1P39059 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.86■■□□□ 1.57
COL15A1P39059 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL15A1P39059 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
COL15A1P39059 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.85■■□□□ 1.57
COL15A1P39059 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL15A1P39059 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.85■■□□□ 1.57
COL15A1P39059 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL15A1P39059 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL15A1P39059 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL15A1P39059 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.85■■□□□ 1.57
COL15A1P39059 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
COL15A1P39059 AL031133.1-201ENST00000406807 723 ntBASIC24.85■■□□□ 1.57
COL15A1P39059 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
COL15A1P39059 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms