Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
USP6P35125 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
USP6P35125 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC26.57■■□□□ 1.84
USP6P35125 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC26.57■■□□□ 1.84
USP6P35125 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 KRT8P41-201ENST00000533985 1514 ntBASIC26.57■■□□□ 1.84
USP6P35125 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP6P35125 LINC01465-201ENST00000408887 1940 ntBASIC26.57■■□□□ 1.84
USP6P35125 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.56■■□□□ 1.84
USP6P35125 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP6P35125 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP6P35125 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP6P35125 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP6P35125 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
USP6P35125 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.56■■□□□ 1.84
USP6P35125 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP6P35125 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.56■■□□□ 1.84
USP6P35125 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
USP6P35125 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP6P35125 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
USP6P35125 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
USP6P35125 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP6P35125 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
USP6P35125 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP6P35125 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.55■■□□□ 1.84
USP6P35125 AC020907.5-201ENST00000624372 1936 ntBASIC26.55■■□□□ 1.84
USP6P35125 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP6P35125 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.55■■□□□ 1.84
USP6P35125 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
USP6P35125 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
USP6P35125 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.55■■□□□ 1.84
USP6P35125 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.55■■□□□ 1.84
USP6P35125 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
USP6P35125 LINC01238-205ENST00000567549 1107 ntBASIC26.55■■□□□ 1.84
USP6P35125 AL358472.4-201ENST00000633140 710 ntBASIC26.55■■□□□ 1.84
USP6P35125 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
USP6P35125 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP6P35125 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.55■■□□□ 1.84
USP6P35125 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USP6P35125 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP6P35125 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
USP6P35125 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 RNF152P1-201ENST00000397754 604 ntBASIC26.54■■□□□ 1.84
USP6P35125 AL031133.1-201ENST00000406807 723 ntBASIC26.54■■□□□ 1.84
USP6P35125 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
USP6P35125 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC26.54■■□□□ 1.84
USP6P35125 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.54■■□□□ 1.84
USP6P35125 CA15P1-201ENST00000481698 905 ntBASIC26.54■■□□□ 1.84
USP6P35125 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.54■■□□□ 1.84
USP6P35125 AC141257.4-201ENST00000634557 245 ntBASIC26.54■■□□□ 1.84
USP6P35125 AC136944.6-201ENST00000634818 245 ntBASIC26.54■■□□□ 1.84
USP6P35125 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP6P35125 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.54■■□□□ 1.84
USP6P35125 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.53■■□□□ 1.84
USP6P35125 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC26.53■■□□□ 1.84
USP6P35125 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP6P35125 COPE-203ENST00000351079 907 ntTSL 2 BASIC26.53■■□□□ 1.84
USP6P35125 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.53■■□□□ 1.84
USP6P35125 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.53■■□□□ 1.84
USP6P35125 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC26.53■■□□□ 1.84
USP6P35125 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USP6P35125 AL353719.1-201ENST00000566847 864 ntBASIC26.53■■□□□ 1.84
USP6P35125 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.53■■□□□ 1.84
USP6P35125 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP6P35125 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USP6P35125 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP6P35125 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
USP6P35125 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP6P35125 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
USP6P35125 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
USP6P35125 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
USP6P35125 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC26.52■■□□□ 1.84
USP6P35125 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP6P35125 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.52■■□□□ 1.84
USP6P35125 TSPY17P-201ENST00000450329 467 ntBASIC26.52■■□□□ 1.84
USP6P35125 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26.52■■□□□ 1.84
USP6P35125 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.52■■□□□ 1.84
USP6P35125 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
USP6P35125 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms