Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.84■■□□□ 1.73
RXRBP28702 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.84■■□□□ 1.73
RXRBP28702 MIR564-202ENST00000385049 94 ntBASIC25.84■■□□□ 1.73
RXRBP28702 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 DRAXINP1-201ENST00000437611 948 ntBASIC25.84■■□□□ 1.73
RXRBP28702 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC25.84■■□□□ 1.73
RXRBP28702 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
RXRBP28702 TPSP2-201ENST00000561760 610 ntBASIC25.84■■□□□ 1.73
RXRBP28702 AC012615.1-201ENST00000565797 1299 ntBASIC25.84■■□□□ 1.73
RXRBP28702 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC25.84■■□□□ 1.73
RXRBP28702 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RXRBP28702 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.84■■□□□ 1.73
RXRBP28702 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.84■■□□□ 1.73
RXRBP28702 AC080038.3-201ENST00000623346 1952 ntBASIC25.84■■□□□ 1.73
RXRBP28702 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RXRBP28702 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RXRBP28702 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.83■■□□□ 1.73
RXRBP28702 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RXRBP28702 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC25.83■■□□□ 1.73
RXRBP28702 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.83■■□□□ 1.73
RXRBP28702 AP001005.1-201ENST00000571755 1248 ntBASIC25.83■■□□□ 1.73
RXRBP28702 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.83■■□□□ 1.73
RXRBP28702 AL353801.3-201ENST00000609898 542 ntBASIC25.83■■□□□ 1.73
RXRBP28702 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC25.83■■□□□ 1.73
RXRBP28702 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RXRBP28702 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.83■■□□□ 1.73
RXRBP28702 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.83■■□□□ 1.73
RXRBP28702 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.83■■□□□ 1.73
RXRBP28702 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RXRBP28702 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.83■■□□□ 1.73
RXRBP28702 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
RXRBP28702 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RXRBP28702 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.72
RXRBP28702 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.83■■□□□ 1.72
RXRBP28702 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.83■■□□□ 1.72
RXRBP28702 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.82■■□□□ 1.72
RXRBP28702 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RXRBP28702 FABP5-202ENST00000396359 986 ntTSL 5 BASIC25.82■■□□□ 1.72
RXRBP28702 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC25.82■■□□□ 1.72
RXRBP28702 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.82■■□□□ 1.72
RXRBP28702 PPIE-208ENST00000470213 927 ntTSL 3 BASIC25.82■■□□□ 1.72
RXRBP28702 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.82■■□□□ 1.72
RXRBP28702 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC25.82■■□□□ 1.72
RXRBP28702 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC25.82■■□□□ 1.72
RXRBP28702 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC25.82■■□□□ 1.72
RXRBP28702 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
RXRBP28702 AC064862.7-201ENST00000604520 867 ntBASIC25.82■■□□□ 1.72
RXRBP28702 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC25.82■■□□□ 1.72
RXRBP28702 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RXRBP28702 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RXRBP28702 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RXRBP28702 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.82■■□□□ 1.72
RXRBP28702 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RXRBP28702 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.81■■□□□ 1.72
RXRBP28702 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RXRBP28702 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
RXRBP28702 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.81■■□□□ 1.72
RXRBP28702 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RXRBP28702 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC25.81■■□□□ 1.72
RXRBP28702 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RXRBP28702 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RXRBP28702 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.81■■□□□ 1.72
RXRBP28702 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RXRBP28702 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
RXRBP28702 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RXRBP28702 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RXRBP28702 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.8■■□□□ 1.72
RXRBP28702 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RXRBP28702 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
RXRBP28702 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.8■■□□□ 1.72
RXRBP28702 TLE1-202ENST00000376484 666 ntTSL 3 BASIC25.8■■□□□ 1.72
RXRBP28702 RNA5SP419-201ENST00000515908 135 ntBASIC25.8■■□□□ 1.72
RXRBP28702 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC25.8■■□□□ 1.72
RXRBP28702 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.8■■□□□ 1.72
RXRBP28702 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RXRBP28702 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
RXRBP28702 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RXRBP28702 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
RXRBP28702 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.79■■□□□ 1.72
RXRBP28702 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.79■■□□□ 1.72
RXRBP28702 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 AC034232.1-201ENST00000506026 1064 ntBASIC25.79■■□□□ 1.72
RXRBP28702 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.79■■□□□ 1.72
RXRBP28702 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
RXRBP28702 TERC-201ENST00000602385 541 ntBASIC25.79■■□□□ 1.72
RXRBP28702 AC140113.2-201ENST00000604370 208 ntBASIC25.79■■□□□ 1.72
RXRBP28702 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.79■■□□□ 1.72
RXRBP28702 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RXRBP28702 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms