Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 KRT17P3-201ENST00000420566 1262 ntBASIC19.78■□□□□ 0.76
HLA-DPA1P20036 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 AL158211.5-201ENST00000623583 2518 ntBASIC19.78■□□□□ 0.76
HLA-DPA1P20036 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPA1P20036 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 YBX1P10-201ENST00000444752 975 ntBASIC19.77■□□□□ 0.76
HLA-DPA1P20036 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPA1P20036 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DPA1P20036 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DPA1P20036 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 ESRRAP1-201ENST00000400596 1257 ntBASIC19.76■□□□□ 0.75
HLA-DPA1P20036 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 PRKY-204ENST00000533551 1019 ntBASIC19.76■□□□□ 0.75
HLA-DPA1P20036 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPA1P20036 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.75■□□□□ 0.75
HLA-DPA1P20036 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 AC069544.1-201ENST00000609399 999 ntBASIC19.75■□□□□ 0.75
HLA-DPA1P20036 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.75■□□□□ 0.75
HLA-DPA1P20036 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPA1P20036 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPA1P20036 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms