Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC2P18074 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ERCC2P18074 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.18■□□□□ 0.82
ERCC2P18074 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ERCC2P18074 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.17■□□□□ 0.82
ERCC2P18074 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ERCC2P18074 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ERCC2P18074 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.17■□□□□ 0.82
ERCC2P18074 AC128676.1-201ENST00000454392 318 ntBASIC20.17■□□□□ 0.82
ERCC2P18074 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ERCC2P18074 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.17■□□□□ 0.82
ERCC2P18074 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ERCC2P18074 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC2P18074 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ERCC2P18074 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC2P18074 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
ERCC2P18074 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC2P18074 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC2P18074 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC2P18074 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ERCC2P18074 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ERCC2P18074 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.15■□□□□ 0.82
ERCC2P18074 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.15■□□□□ 0.82
ERCC2P18074 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.15■□□□□ 0.82
ERCC2P18074 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.15■□□□□ 0.82
ERCC2P18074 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.15■□□□□ 0.82
ERCC2P18074 AL023875.1-201ENST00000640777 796 ntBASIC20.15■□□□□ 0.82
ERCC2P18074 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.15■□□□□ 0.82
ERCC2P18074 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ERCC2P18074 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ERCC2P18074 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC2P18074 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ERCC2P18074 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC2P18074 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.14■□□□□ 0.82
ERCC2P18074 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.14■□□□□ 0.81
ERCC2P18074 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 NBPF21P-201ENST00000425093 1451 ntBASIC20.14■□□□□ 0.81
ERCC2P18074 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
ERCC2P18074 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 FAM201B-201ENST00000458407 597 ntBASIC20.14■□□□□ 0.81
ERCC2P18074 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.14■□□□□ 0.81
ERCC2P18074 KRT18P16-201ENST00000510337 1294 ntBASIC20.14■□□□□ 0.81
ERCC2P18074 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.14■□□□□ 0.81
ERCC2P18074 RN7SL471P-201ENST00000580476 299 ntBASIC20.14■□□□□ 0.81
ERCC2P18074 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.14■□□□□ 0.81
ERCC2P18074 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ERCC2P18074 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC2P18074 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ERCC2P18074 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ERCC2P18074 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.13■□□□□ 0.81
ERCC2P18074 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.13■□□□□ 0.81
ERCC2P18074 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.13■□□□□ 0.81
ERCC2P18074 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.13■□□□□ 0.81
ERCC2P18074 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ERCC2P18074 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.13■□□□□ 0.81
ERCC2P18074 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ERCC2P18074 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.13■□□□□ 0.81
ERCC2P18074 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms