Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACANP16112 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACANP16112 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACANP16112 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACANP16112 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACANP16112 HLA-G-202ENST00000376815 851 ntBASIC16.09■□□□□ 0.17
ACANP16112 HLA-G-203ENST00000376818 1127 ntBASIC16.09■□□□□ 0.17
ACANP16112 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACANP16112 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.09■□□□□ 0.17
ACANP16112 HMGN1P19-201ENST00000436976 333 ntBASIC16.09■□□□□ 0.17
ACANP16112 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ACANP16112 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.09■□□□□ 0.17
ACANP16112 CA15P1-201ENST00000481698 905 ntBASIC16.09■□□□□ 0.17
ACANP16112 NEK4P2-201ENST00000580004 1012 ntBASIC16.09■□□□□ 0.17
ACANP16112 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ACANP16112 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACANP16112 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACANP16112 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ACANP16112 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
ACANP16112 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.08■□□□□ 0.17
ACANP16112 AC117500.6-201ENST00000624871 588 ntBASIC16.08■□□□□ 0.17
ACANP16112 HLA-A-209ENST00000638375 975 ntBASIC16.08■□□□□ 0.17
ACANP16112 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACANP16112 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.08■□□□□ 0.17
ACANP16112 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
ACANP16112 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ACANP16112 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.08■□□□□ 0.16
ACANP16112 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.08■□□□□ 0.16
ACANP16112 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.08■□□□□ 0.16
ACANP16112 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.08■□□□□ 0.16
ACANP16112 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACANP16112 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ACANP16112 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
ACANP16112 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.07■□□□□ 0.16
ACANP16112 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.07■□□□□ 0.16
ACANP16112 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ACANP16112 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 AC116351.2-201ENST00000606540 1585 ntBASIC16.07■□□□□ 0.16
ACANP16112 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.07■□□□□ 0.16
ACANP16112 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.07■□□□□ 0.16
ACANP16112 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ACANP16112 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.07■□□□□ 0.16
ACANP16112 GCSHP2-201ENST00000560971 527 ntBASIC16.07■□□□□ 0.16
ACANP16112 KRT8P17-201ENST00000453110 1448 ntBASIC16.07■□□□□ 0.16
ACANP16112 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ACANP16112 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 BX119927.1-201ENST00000636596 1552 ntBASIC16.06■□□□□ 0.16
ACANP16112 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 AC092597.1-201ENST00000487352 616 ntBASIC16.06■□□□□ 0.16
ACANP16112 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 AC092329.2-201ENST00000598402 547 ntBASIC16.06■□□□□ 0.16
ACANP16112 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 AC120114.3-201ENST00000611923 658 ntBASIC16.06■□□□□ 0.16
ACANP16112 AL031008.1-201ENST00000619963 541 ntBASIC16.06■□□□□ 0.16
ACANP16112 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.06■□□□□ 0.16
ACANP16112 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ACANP16112 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ACANP16112 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 AC079781.3-201ENST00000449110 356 ntBASIC16.06■□□□□ 0.16
ACANP16112 AC106795.1-205ENST00000512851 1056 ntBASIC16.06■□□□□ 0.16
ACANP16112 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
ACANP16112 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ACANP16112 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACANP16112 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.05■□□□□ 0.16
ACANP16112 AC016734.2-201ENST00000624325 1377 ntBASIC16.05■□□□□ 0.16
ACANP16112 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACANP16112 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACANP16112 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ACANP16112 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ACANP16112 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
ACANP16112 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms