Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.11■■□□□ 1.45
COL11A2P13942 KRT8P45-201ENST00000414328 1447 ntBASIC24.11■■□□□ 1.45
COL11A2P13942 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL11A2P13942 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL11A2P13942 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.11■■□□□ 1.45
COL11A2P13942 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL11A2P13942 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL11A2P13942 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL11A2P13942 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL11A2P13942 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 AC026396.1-201ENST00000419388 421 ntBASIC24.1■■□□□ 1.45
COL11A2P13942 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.1■■□□□ 1.45
COL11A2P13942 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
COL11A2P13942 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.1■■□□□ 1.45
COL11A2P13942 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.1■■□□□ 1.45
COL11A2P13942 LINC01465-201ENST00000408887 1940 ntBASIC24.1■■□□□ 1.45
COL11A2P13942 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
COL11A2P13942 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.1■■□□□ 1.45
COL11A2P13942 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.1■■□□□ 1.45
COL11A2P13942 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.1■■□□□ 1.45
COL11A2P13942 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.1■■□□□ 1.45
COL11A2P13942 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.1■■□□□ 1.45
COL11A2P13942 HYMAI.1-201ENST00000620949 238 ntBASIC24.1■■□□□ 1.45
COL11A2P13942 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL11A2P13942 BX119927.1-201ENST00000636596 1552 ntBASIC24.1■■□□□ 1.45
COL11A2P13942 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
COL11A2P13942 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL11A2P13942 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.09■■□□□ 1.45
COL11A2P13942 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL11A2P13942 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.09■■□□□ 1.45
COL11A2P13942 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.09■■□□□ 1.45
COL11A2P13942 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.09■■□□□ 1.45
COL11A2P13942 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL11A2P13942 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.09■■□□□ 1.45
COL11A2P13942 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL11A2P13942 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.09■■□□□ 1.45
COL11A2P13942 AC007225.1-201ENST00000566331 1836 ntBASIC24.08■■□□□ 1.45
COL11A2P13942 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.08■■□□□ 1.45
COL11A2P13942 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.08■■□□□ 1.45
COL11A2P13942 AL117328.2-201ENST00000624617 1940 ntBASIC24.08■■□□□ 1.45
COL11A2P13942 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.08■■□□□ 1.45
COL11A2P13942 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL11A2P13942 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL11A2P13942 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.45
COL11A2P13942 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL11A2P13942 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.08■■□□□ 1.45
COL11A2P13942 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL11A2P13942 NPAP1P7-201ENST00000613027 823 ntBASIC24.08■■□□□ 1.45
COL11A2P13942 AC092720.2-201ENST00000602388 1665 ntBASIC24.08■■□□□ 1.45
COL11A2P13942 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL11A2P13942 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL11A2P13942 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.08■■□□□ 1.44
COL11A2P13942 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
COL11A2P13942 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.44
COL11A2P13942 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
COL11A2P13942 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
COL11A2P13942 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 CKBP1-201ENST00000565489 1086 ntBASIC24.07■■□□□ 1.44
COL11A2P13942 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.07■■□□□ 1.44
COL11A2P13942 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
COL11A2P13942 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
COL11A2P13942 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.07■■□□□ 1.44
COL11A2P13942 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
COL11A2P13942 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL11A2P13942 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.07■■□□□ 1.44
COL11A2P13942 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.07■■□□□ 1.44
COL11A2P13942 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.07■■□□□ 1.44
COL11A2P13942 AL160286.2-201ENST00000567150 934 ntBASIC24.07■■□□□ 1.44
COL11A2P13942 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.07■■□□□ 1.44
COL11A2P13942 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
COL11A2P13942 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.07■■□□□ 1.44
COL11A2P13942 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL11A2P13942 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL11A2P13942 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL11A2P13942 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.06■■□□□ 1.44
COL11A2P13942 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL11A2P13942 AL512604.3-201ENST00000569583 964 ntBASIC24.06■■□□□ 1.44
COL11A2P13942 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.06■■□□□ 1.44
COL11A2P13942 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.06■■□□□ 1.44
COL11A2P13942 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL11A2P13942 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.05■■□□□ 1.44
COL11A2P13942 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.05■■□□□ 1.44
COL11A2P13942 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL11A2P13942 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL11A2P13942 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.05■■□□□ 1.44
COL11A2P13942 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL11A2P13942 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms