Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TPRP12270 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.41■□□□□ 0.54
TPRP12270 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.41■□□□□ 0.54
TPRP12270 KRT18P67-201ENST00000432816 1264 ntBASIC18.41■□□□□ 0.54
TPRP12270 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.41■□□□□ 0.54
TPRP12270 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TPRP12270 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPRP12270 TSSC2-201ENST00000450217 709 ntBASIC18.41■□□□□ 0.54
TPRP12270 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.41■□□□□ 0.54
TPRP12270 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.41■□□□□ 0.54
TPRP12270 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.41■□□□□ 0.54
TPRP12270 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.41■□□□□ 0.54
TPRP12270 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.41■□□□□ 0.54
TPRP12270 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.41■□□□□ 0.54
TPRP12270 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
TPRP12270 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.4■□□□□ 0.54
TPRP12270 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
TPRP12270 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.4■□□□□ 0.54
TPRP12270 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPRP12270 AC131212.4-201ENST00000623606 975 ntBASIC18.4■□□□□ 0.54
TPRP12270 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.4■□□□□ 0.54
TPRP12270 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.4■□□□□ 0.54
TPRP12270 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
TPRP12270 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TPRP12270 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.4■□□□□ 0.54
TPRP12270 AC092597.1-201ENST00000487352 616 ntBASIC18.4■□□□□ 0.54
TPRP12270 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TPRP12270 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.4■□□□□ 0.54
TPRP12270 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPRP12270 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPRP12270 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.39■□□□□ 0.53
TPRP12270 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.39■□□□□ 0.53
TPRP12270 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.39■□□□□ 0.53
TPRP12270 AC004980.1-204ENST00000429707 299 ntBASIC18.39■□□□□ 0.53
TPRP12270 AP000867.3-201ENST00000524675 377 ntBASIC18.39■□□□□ 0.53
TPRP12270 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.39■□□□□ 0.53
TPRP12270 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.39■□□□□ 0.53
TPRP12270 AP002414.4-201ENST00000589764 1148 ntBASIC18.39■□□□□ 0.53
TPRP12270 AC027601.4-201ENST00000611259 610 ntBASIC18.39■□□□□ 0.53
TPRP12270 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TPRP12270 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TPRP12270 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.39■□□□□ 0.53
TPRP12270 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.39■□□□□ 0.53
TPRP12270 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.39■□□□□ 0.53
TPRP12270 GCSHP2-201ENST00000560971 527 ntBASIC18.39■□□□□ 0.53
TPRP12270 AL121772.3-201ENST00000610840 674 ntBASIC18.39■□□□□ 0.53
TPRP12270 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPRP12270 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TPRP12270 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPRP12270 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.38■□□□□ 0.53
TPRP12270 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.38■□□□□ 0.53
TPRP12270 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.38■□□□□ 0.53
TPRP12270 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.38■□□□□ 0.53
TPRP12270 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.38■□□□□ 0.53
TPRP12270 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.38■□□□□ 0.53
TPRP12270 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.38■□□□□ 0.53
TPRP12270 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
TPRP12270 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.38■□□□□ 0.53
TPRP12270 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPRP12270 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.38■□□□□ 0.53
TPRP12270 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.38■□□□□ 0.53
TPRP12270 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
TPRP12270 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPRP12270 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TPRP12270 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.37■□□□□ 0.53
TPRP12270 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
TPRP12270 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPRP12270 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.37■□□□□ 0.53
TPRP12270 DRAXINP1-201ENST00000437611 948 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms