Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.05■□□□□ 0.64
PCNAP12004 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
PCNAP12004 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCNAP12004 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCNAP12004 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 AL355802.2-201ENST00000402069 882 ntBASIC19.04■□□□□ 0.64
PCNAP12004 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.04■□□□□ 0.64
PCNAP12004 AC005829.2-201ENST00000571422 1056 ntBASIC19.04■□□□□ 0.64
PCNAP12004 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.04■□□□□ 0.64
PCNAP12004 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCNAP12004 AC009237.14-201ENST00000609975 1594 ntBASIC19.04■□□□□ 0.64
PCNAP12004 AP001271.2-201ENST00000624018 1556 ntBASIC19.04■□□□□ 0.64
PCNAP12004 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.04■□□□□ 0.64
PCNAP12004 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.04■□□□□ 0.64
PCNAP12004 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.04■□□□□ 0.64
PCNAP12004 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCNAP12004 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 AC092368.3-202ENST00000574180 1591 ntBASIC19.03■□□□□ 0.64
PCNAP12004 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.03■□□□□ 0.64
PCNAP12004 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.03■□□□□ 0.64
PCNAP12004 MYC-209ENST00000641252 345 ntBASIC19.03■□□□□ 0.64
PCNAP12004 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCNAP12004 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
PCNAP12004 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
PCNAP12004 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.03■□□□□ 0.64
PCNAP12004 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCNAP12004 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCNAP12004 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PCNAP12004 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.02■□□□□ 0.64
PCNAP12004 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCNAP12004 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCNAP12004 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCNAP12004 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.02■□□□□ 0.64
PCNAP12004 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.02■□□□□ 0.64
PCNAP12004 HLA-L-209ENST00000420110 1011 ntBASIC19.02■□□□□ 0.64
PCNAP12004 AC069152.1-201ENST00000438030 544 ntBASIC19.02■□□□□ 0.64
PCNAP12004 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.02■□□□□ 0.64
PCNAP12004 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.02■□□□□ 0.64
PCNAP12004 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.02■□□□□ 0.64
PCNAP12004 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCNAP12004 AC133041.1-202ENST00000642053 222 ntBASIC19.02■□□□□ 0.64
PCNAP12004 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
PCNAP12004 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCNAP12004 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.02■□□□□ 0.63
PCNAP12004 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCNAP12004 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.02■□□□□ 0.63
PCNAP12004 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.01■□□□□ 0.63
PCNAP12004 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.01■□□□□ 0.63
PCNAP12004 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.01■□□□□ 0.63
PCNAP12004 AC083880.1-201ENST00000608266 535 ntBASIC19.01■□□□□ 0.63
PCNAP12004 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCNAP12004 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCNAP12004 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.01■□□□□ 0.63
PCNAP12004 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms