Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC116562.2-201ENST00000507042 360 ntBASIC15.32■□□□□ 0.04
CD28P10747 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
CD28P10747 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.32■□□□□ 0.04
CD28P10747 C1QL1P1-201ENST00000568105 661 ntBASIC15.32■□□□□ 0.04
CD28P10747 RN7SL850P-201ENST00000579959 291 ntBASIC15.32■□□□□ 0.04
CD28P10747 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.32■□□□□ 0.04
CD28P10747 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD28P10747 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CD28P10747 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD28P10747 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CD28P10747 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CD28P10747 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.32■□□□□ 0.04
CD28P10747 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.32■□□□□ 0.04
CD28P10747 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.32■□□□□ 0.04
CD28P10747 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD28P10747 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.31■□□□□ 0.04
CD28P10747 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.31■□□□□ 0.04
CD28P10747 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.31■□□□□ 0.04
CD28P10747 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.31■□□□□ 0.04
CD28P10747 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.31■□□□□ 0.04
CD28P10747 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.31■□□□□ 0.04
CD28P10747 YBX1P10-201ENST00000444752 975 ntBASIC15.31■□□□□ 0.04
CD28P10747 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.31■□□□□ 0.04
CD28P10747 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.31■□□□□ 0.04
CD28P10747 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD28P10747 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 AC145285.6-201ENST00000604632 637 ntBASIC15.31■□□□□ 0.04
CD28P10747 AL031985.4-201ENST00000642138 673 ntBASIC15.31■□□□□ 0.04
CD28P10747 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CD28P10747 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.31■□□□□ 0.04
CD28P10747 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD28P10747 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD28P10747 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.31■□□□□ 0.04
CD28P10747 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 TUBB8P6-201ENST00000436895 1288 ntBASIC15.3■□□□□ 0.04
CD28P10747 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.3■□□□□ 0.04
CD28P10747 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD28P10747 NAPSB-206ENST00000562112 1266 ntBASIC15.3■□□□□ 0.04
CD28P10747 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.3■□□□□ 0.04
CD28P10747 AC005363.2-201ENST00000618631 242 ntBASIC15.3■□□□□ 0.04
CD28P10747 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD28P10747 LINC01568-207ENST00000641790 1380 ntBASIC15.3■□□□□ 0.04
CD28P10747 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD28P10747 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
CD28P10747 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 PHGDH-210ENST00000641115 1638 ntBASIC15.29■□□□□ 0.04
CD28P10747 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD28P10747 CYP2D8P-201ENST00000433633 1490 ntBASIC15.29■□□□□ 0.04
CD28P10747 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.29■□□□□ 0.04
CD28P10747 FITM1-202ENST00000559294 800 ntBASIC15.29■□□□□ 0.04
CD28P10747 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.29■□□□□ 0.04
CD28P10747 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.29■□□□□ 0.04
CD28P10747 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.29■□□□□ 0.04
CD28P10747 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.29■□□□□ 0.04
CD28P10747 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD28P10747 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD28P10747 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD28P10747 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD28P10747 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CD28P10747 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD28P10747 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD28P10747 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD28P10747 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms