Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTSDP07339 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CTSDP07339 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CTSDP07339 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSDP07339 HLA-G-202ENST00000376815 851 ntBASIC16.25■□□□□ 0.19
CTSDP07339 HLA-G-203ENST00000376818 1127 ntBASIC16.25■□□□□ 0.19
CTSDP07339 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
CTSDP07339 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CTSDP07339 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CTSDP07339 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.25■□□□□ 0.19
CTSDP07339 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CTSDP07339 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSDP07339 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.24■□□□□ 0.19
CTSDP07339 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.24■□□□□ 0.19
CTSDP07339 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTSDP07339 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 AL049812.1-201ENST00000432563 2267 ntBASIC16.24■□□□□ 0.19
CTSDP07339 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.24■□□□□ 0.19
CTSDP07339 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 AC006333.2-201ENST00000607957 2099 ntBASIC16.24■□□□□ 0.19
CTSDP07339 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.24■□□□□ 0.19
CTSDP07339 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.24■□□□□ 0.19
CTSDP07339 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.24■□□□□ 0.19
CTSDP07339 AL591742.1-201ENST00000604433 565 ntBASIC16.24■□□□□ 0.19
CTSDP07339 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTSDP07339 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTSDP07339 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CTSDP07339 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.23■□□□□ 0.19
CTSDP07339 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 AC007613.1-201ENST00000572811 2597 ntBASIC16.23■□□□□ 0.19
CTSDP07339 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.23■□□□□ 0.19
CTSDP07339 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CTSDP07339 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.23■□□□□ 0.19
CTSDP07339 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.23■□□□□ 0.19
CTSDP07339 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.23■□□□□ 0.19
CTSDP07339 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.23■□□□□ 0.19
CTSDP07339 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTSDP07339 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CTSDP07339 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.23■□□□□ 0.19
CTSDP07339 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTSDP07339 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms