Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.93■■□□□ 1.74
COL5A2P05997 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC25.93■■□□□ 1.74
COL5A2P05997 CKBP1-201ENST00000565489 1086 ntBASIC25.93■■□□□ 1.74
COL5A2P05997 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.93■■□□□ 1.74
COL5A2P05997 HYMAI.1-201ENST00000620949 238 ntBASIC25.93■■□□□ 1.74
COL5A2P05997 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL5A2P05997 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
COL5A2P05997 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL5A2P05997 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL5A2P05997 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
COL5A2P05997 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
COL5A2P05997 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 AC006128.1-201ENST00000624704 1661 ntBASIC25.92■■□□□ 1.74
COL5A2P05997 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.92■■□□□ 1.74
COL5A2P05997 AL160286.2-201ENST00000567150 934 ntBASIC25.92■■□□□ 1.74
COL5A2P05997 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.92■■□□□ 1.74
COL5A2P05997 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.92■■□□□ 1.74
COL5A2P05997 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC25.92■■□□□ 1.74
COL5A2P05997 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.92■■□□□ 1.74
COL5A2P05997 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.92■■□□□ 1.74
COL5A2P05997 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 KRT8P41-201ENST00000533985 1514 ntBASIC25.92■■□□□ 1.74
COL5A2P05997 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL5A2P05997 NT5C-210ENST00000582160 860 ntTSL 2 BASIC25.91■■□□□ 1.74
COL5A2P05997 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.91■■□□□ 1.74
COL5A2P05997 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 AC007225.1-201ENST00000566331 1836 ntBASIC25.91■■□□□ 1.74
COL5A2P05997 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.91■■□□□ 1.74
COL5A2P05997 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 ZNF444P1-201ENST00000559497 298 ntBASIC25.91■■□□□ 1.74
COL5A2P05997 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.91■■□□□ 1.74
COL5A2P05997 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
COL5A2P05997 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL5A2P05997 AC092720.2-201ENST00000602388 1665 ntBASIC25.9■■□□□ 1.74
COL5A2P05997 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL5A2P05997 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL5A2P05997 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
COL5A2P05997 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.9■■□□□ 1.74
COL5A2P05997 AF106564.1-201ENST00000607058 2553 ntBASIC25.9■■□□□ 1.74
COL5A2P05997 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.9■■□□□ 1.74
COL5A2P05997 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL5A2P05997 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC25.9■■□□□ 1.74
COL5A2P05997 SPDYE13P-201ENST00000445314 798 ntBASIC25.9■■□□□ 1.74
COL5A2P05997 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC25.9■■□□□ 1.74
COL5A2P05997 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC25.9■■□□□ 1.74
COL5A2P05997 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC25.9■■□□□ 1.74
COL5A2P05997 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC25.9■■□□□ 1.74
COL5A2P05997 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
COL5A2P05997 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL5A2P05997 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
COL5A2P05997 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL5A2P05997 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
COL5A2P05997 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL5A2P05997 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL5A2P05997 AL117328.2-201ENST00000624617 1940 ntBASIC25.89■■□□□ 1.74
COL5A2P05997 SPDYE15P-201ENST00000424157 909 ntBASIC25.89■■□□□ 1.73
COL5A2P05997 ATP5G2P1-201ENST00000433580 426 ntBASIC25.89■■□□□ 1.73
COL5A2P05997 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC25.89■■□□□ 1.73
COL5A2P05997 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC25.89■■□□□ 1.73
COL5A2P05997 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.89■■□□□ 1.73
COL5A2P05997 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL5A2P05997 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL5A2P05997 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL5A2P05997 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC25.89■■□□□ 1.73
COL5A2P05997 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL5A2P05997 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL5A2P05997 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.88■■□□□ 1.73
COL5A2P05997 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL5A2P05997 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL5A2P05997 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
COL5A2P05997 Telomerase-vert.1-201ENST00000363312 438 ntBASIC25.88■■□□□ 1.73
COL5A2P05997 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC25.88■■□□□ 1.73
COL5A2P05997 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC25.88■■□□□ 1.73
COL5A2P05997 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25.88■■□□□ 1.73
COL5A2P05997 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.88■■□□□ 1.73
COL5A2P05997 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC25.88■■□□□ 1.73
COL5A2P05997 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC25.88■■□□□ 1.73
COL5A2P05997 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.88■■□□□ 1.73
COL5A2P05997 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.88■■□□□ 1.73
COL5A2P05997 LINC01465-201ENST00000408887 1940 ntBASIC25.88■■□□□ 1.73
COL5A2P05997 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
COL5A2P05997 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
COL5A2P05997 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.87■■□□□ 1.73
COL5A2P05997 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC25.87■■□□□ 1.73
COL5A2P05997 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.87■■□□□ 1.73
COL5A2P05997 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 TSPY21P-201ENST00000433481 731 ntBASIC25.87■■□□□ 1.73
COL5A2P05997 TSPY23P-201ENST00000440136 739 ntBASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms