Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
P04436 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04436 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.92■□□□□ 0.46
P04436 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
P04436 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 AL691432.2-201ENST00000607222 2038 ntBASIC17.91■□□□□ 0.46
P04436 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.91■□□□□ 0.46
P04436 TMEM179-206ENST00000616017 1645 ntBASIC17.91■□□□□ 0.46
P04436 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.91■□□□□ 0.46
P04436 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.91■□□□□ 0.46
P04436 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.91■□□□□ 0.46
P04436 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
P04436 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.91■□□□□ 0.46
P04436 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.91■□□□□ 0.46
P04436 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.91■□□□□ 0.46
P04436 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P04436 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 KRT16P1-201ENST00000399124 1418 ntBASIC17.9■□□□□ 0.46
P04436 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
P04436 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.9■□□□□ 0.46
P04436 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.9■□□□□ 0.46
P04436 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.9■□□□□ 0.46
P04436 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.9■□□□□ 0.46
P04436 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04436 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
P04436 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
P04436 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
P04436 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.89■□□□□ 0.46
P04436 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
P04436 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
P04436 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
P04436 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.89■□□□□ 0.45
P04436 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 AP003071.4-201ENST00000562276 1284 ntBASIC17.89■□□□□ 0.45
P04436 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
P04436 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
P04436 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
P04436 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.89■□□□□ 0.45
P04436 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
P04436 AL157384.1-201ENST00000445995 2473 ntBASIC17.89■□□□□ 0.45
P04436 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
P04436 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04436 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.88■□□□□ 0.45
P04436 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
P04436 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04436 AC099778.1-201ENST00000568593 1911 ntBASIC17.88■□□□□ 0.45
P04436 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04436 AC009237.14-201ENST00000609975 1594 ntBASIC17.88■□□□□ 0.45
P04436 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04436 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.88■□□□□ 0.45
P04436 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04436 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.88■□□□□ 0.45
P04436 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms