Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
MT-ND1P03886 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 AC097381.1-201ENST00000429019 1296 ntBASIC18.45■□□□□ 0.54
MT-ND1P03886 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND1P03886 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MT-ND1P03886 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MT-ND1P03886 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND1P03886 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MT-ND1P03886 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 AC087633.2-202ENST00000565166 1439 ntBASIC18.44■□□□□ 0.54
MT-ND1P03886 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-ND1P03886 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MT-ND1P03886 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.44■□□□□ 0.54
MT-ND1P03886 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-ND1P03886 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
MT-ND1P03886 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 AL138781.2-201ENST00000617896 1843 ntBASIC18.44■□□□□ 0.54
MT-ND1P03886 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-ND1P03886 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
MT-ND1P03886 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND1P03886 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MT-ND1P03886 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MT-ND1P03886 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND1P03886 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MT-ND1P03886 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MT-ND1P03886 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.42■□□□□ 0.54
MT-ND1P03886 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MT-ND1P03886 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MT-ND1P03886 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.42■□□□□ 0.54
MT-ND1P03886 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.42■□□□□ 0.54
MT-ND1P03886 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.42■□□□□ 0.54
MT-ND1P03886 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 MIR6821-201ENST00000617625 74 ntBASIC18.42■□□□□ 0.54
MT-ND1P03886 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.42■□□□□ 0.54
MT-ND1P03886 CROCCP3-202ENST00000420820 1947 ntBASIC18.42■□□□□ 0.54
MT-ND1P03886 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.42■□□□□ 0.54
MT-ND1P03886 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND1P03886 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.42■□□□□ 0.54
MT-ND1P03886 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-ND1P03886 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-ND1P03886 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND1P03886 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND1P03886 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms