Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFP01375 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFP01375 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFP01375 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFP01375 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.16■□□□□ 0.66
TNFP01375 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFP01375 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
TNFP01375 AL390955.1-201ENST00000428694 934 ntBASIC19.15■□□□□ 0.66
TNFP01375 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFP01375 AC011506.1-201ENST00000474329 610 ntBASIC19.15■□□□□ 0.66
TNFP01375 NAPSB-206ENST00000562112 1266 ntBASIC19.15■□□□□ 0.66
TNFP01375 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFP01375 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFP01375 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFP01375 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 KRT8P9-201ENST00000558927 1449 ntBASIC19.15■□□□□ 0.66
TNFP01375 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFP01375 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.14■□□□□ 0.66
TNFP01375 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TNFP01375 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
TNFP01375 AL162377.1-201ENST00000618844 1793 ntBASIC19.14■□□□□ 0.66
TNFP01375 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TNFP01375 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TNFP01375 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 MESTP1-201ENST00000404287 994 ntBASIC19.14■□□□□ 0.65
TNFP01375 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFP01375 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFP01375 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFP01375 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 DGCR10-201ENST00000609839 495 ntBASIC19.14■□□□□ 0.65
TNFP01375 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.14■□□□□ 0.65
TNFP01375 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFP01375 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TNFP01375 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFP01375 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TNFP01375 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
TNFP01375 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TNFP01375 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFP01375 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFP01375 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFP01375 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFP01375 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFP01375 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFP01375 AC145285.6-201ENST00000604632 637 ntBASIC19.13■□□□□ 0.65
TNFP01375 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFP01375 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 LINC01568-207ENST00000641790 1380 ntBASIC19.13■□□□□ 0.65
TNFP01375 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
TNFP01375 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFP01375 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFP01375 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFP01375 AL691432.2-201ENST00000607222 2038 ntBASIC19.12■□□□□ 0.65
TNFP01375 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFP01375 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFP01375 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFP01375 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFP01375 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFP01375 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFP01375 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TNFP01375 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TNFP01375 AC009237.14-201ENST00000609975 1594 ntBASIC19.12■□□□□ 0.65
TNFP01375 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TNFP01375 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TNFP01375 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFP01375 AC097488.1-201ENST00000507834 756 ntBASIC19.12■□□□□ 0.65
TNFP01375 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFP01375 AC130371.2-201ENST00000619443 611 ntBASIC19.12■□□□□ 0.65
TNFP01375 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms