Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.32■□□□□ 0.04
TOMM40O96008 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TOMM40O96008 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TOMM40O96008 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TOMM40O96008 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 AC005181.1-201ENST00000604782 1256 ntBASIC15.31■□□□□ 0.04
TOMM40O96008 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 AC004408.2-201ENST00000623613 2777 ntBASIC15.31■□□□□ 0.04
TOMM40O96008 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TOMM40O96008 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 KRT17P1-201ENST00000399211 1546 ntBASIC15.31■□□□□ 0.04
TOMM40O96008 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TOMM40O96008 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.31■□□□□ 0.04
TOMM40O96008 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TOMM40O96008 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TOMM40O96008 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TOMM40O96008 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TOMM40O96008 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TOMM40O96008 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.3■□□□□ 0.04
TOMM40O96008 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.3■□□□□ 0.04
TOMM40O96008 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.3■□□□□ 0.04
TOMM40O96008 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
TOMM40O96008 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TOMM40O96008 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TOMM40O96008 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.3■□□□□ 0.04
TOMM40O96008 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TOMM40O96008 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TOMM40O96008 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.29■□□□□ 0.04
TOMM40O96008 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.29■□□□□ 0.04
TOMM40O96008 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TOMM40O96008 LSM12P1-201ENST00000411836 588 ntBASIC15.29■□□□□ 0.04
TOMM40O96008 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.29■□□□□ 0.04
TOMM40O96008 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 AC093787.1-201ENST00000450396 207 ntBASIC15.29■□□□□ 0.04
TOMM40O96008 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.29■□□□□ 0.04
TOMM40O96008 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.29■□□□□ 0.04
TOMM40O96008 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TOMM40O96008 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 Z82202.1-201ENST00000623446 1880 ntBASIC15.29■□□□□ 0.04
TOMM40O96008 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TOMM40O96008 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TOMM40O96008 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TOMM40O96008 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TOMM40O96008 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TOMM40O96008 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TOMM40O96008 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TOMM40O96008 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TOMM40O96008 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
TOMM40O96008 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms