Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VAPBO95292 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
VAPBO95292 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VAPBO95292 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 RPS2P52-201ENST00000469610 820 ntBASIC19.67■□□□□ 0.74
VAPBO95292 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.67■□□□□ 0.74
VAPBO95292 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VAPBO95292 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 AC104771.1-201ENST00000603335 964 ntBASIC19.67■□□□□ 0.74
VAPBO95292 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.67■□□□□ 0.74
VAPBO95292 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.67■□□□□ 0.74
VAPBO95292 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VAPBO95292 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VAPBO95292 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VAPBO95292 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.66■□□□□ 0.74
VAPBO95292 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.66■□□□□ 0.74
VAPBO95292 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.66■□□□□ 0.74
VAPBO95292 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPBO95292 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPBO95292 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.65■□□□□ 0.74
VAPBO95292 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 AC069152.1-201ENST00000438030 544 ntBASIC19.65■□□□□ 0.74
VAPBO95292 PNMA6B-201ENST00000538162 1200 ntBASIC19.65■□□□□ 0.74
VAPBO95292 AC060766.5-201ENST00000590539 871 ntBASIC19.65■□□□□ 0.74
VAPBO95292 AC133041.1-202ENST00000642053 222 ntBASIC19.65■□□□□ 0.74
VAPBO95292 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VAPBO95292 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VAPBO95292 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPBO95292 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.65■□□□□ 0.74
VAPBO95292 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPBO95292 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPBO95292 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPBO95292 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPBO95292 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.64■□□□□ 0.73
VAPBO95292 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.64■□□□□ 0.73
VAPBO95292 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.64■□□□□ 0.73
VAPBO95292 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.64■□□□□ 0.73
VAPBO95292 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.64■□□□□ 0.73
VAPBO95292 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.64■□□□□ 0.73
VAPBO95292 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 Z82202.1-201ENST00000623446 1880 ntBASIC19.64■□□□□ 0.73
VAPBO95292 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 AC018445.3-201ENST00000624177 1945 ntBASIC19.64■□□□□ 0.73
VAPBO95292 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.64■□□□□ 0.73
VAPBO95292 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VAPBO95292 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VAPBO95292 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VAPBO95292 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.63■□□□□ 0.73
VAPBO95292 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPBO95292 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.63■□□□□ 0.73
VAPBO95292 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
VAPBO95292 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms