Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AFG3L1P-217ENST00000557444 2447 ntBASIC18.96■□□□□ 0.63
CNOT3O75175 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT3O75175 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT3O75175 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CNOT3O75175 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.95■□□□□ 0.62
CNOT3O75175 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CNOT3O75175 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT3O75175 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.95■□□□□ 0.62
CNOT3O75175 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT3O75175 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT3O75175 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CNOT3O75175 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CNOT3O75175 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.95■□□□□ 0.62
CNOT3O75175 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.95■□□□□ 0.62
CNOT3O75175 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT3O75175 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT3O75175 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.94■□□□□ 0.62
CNOT3O75175 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CNOT3O75175 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CNOT3O75175 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CNOT3O75175 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNOT3O75175 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CNOT3O75175 AL390719.1-204ENST00000412397 1219 ntBASIC18.94■□□□□ 0.62
CNOT3O75175 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT3O75175 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT3O75175 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT3O75175 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.94■□□□□ 0.62
CNOT3O75175 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.94■□□□□ 0.62
CNOT3O75175 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNOT3O75175 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT3O75175 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.93■□□□□ 0.62
CNOT3O75175 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CNOT3O75175 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.93■□□□□ 0.62
CNOT3O75175 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.93■□□□□ 0.62
CNOT3O75175 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNOT3O75175 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 AL023875.1-201ENST00000640777 796 ntBASIC18.93■□□□□ 0.62
CNOT3O75175 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNOT3O75175 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT3O75175 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CNOT3O75175 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CNOT3O75175 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CNOT3O75175 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CNOT3O75175 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.93■□□□□ 0.62
CNOT3O75175 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT3O75175 AC018445.3-201ENST00000624177 1945 ntBASIC18.92■□□□□ 0.62
CNOT3O75175 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT3O75175 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT3O75175 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms