Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RBM17P2-201ENST00000616397 1405 ntBASIC15.97■□□□□ 0.15
SSSCA1O60232 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.97■□□□□ 0.15
SSSCA1O60232 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.97■□□□□ 0.15
SSSCA1O60232 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.97■□□□□ 0.15
SSSCA1O60232 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSSCA1O60232 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.97■□□□□ 0.15
SSSCA1O60232 AP001160.3-201ENST00000601484 763 ntBASIC15.97■□□□□ 0.15
SSSCA1O60232 AC243732.1-201ENST00000612648 864 ntBASIC15.97■□□□□ 0.15
SSSCA1O60232 MIR6084-201ENST00000622012 110 ntBASIC15.97■□□□□ 0.15
SSSCA1O60232 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SSSCA1O60232 AC005332.8-201ENST00000622750 2735 ntBASIC15.97■□□□□ 0.15
SSSCA1O60232 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.97■□□□□ 0.15
SSSCA1O60232 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSSCA1O60232 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SSSCA1O60232 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSSCA1O60232 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.97■□□□□ 0.15
SSSCA1O60232 AC104581.1-202ENST00000635932 2618 ntBASIC15.97■□□□□ 0.15
SSSCA1O60232 AP001271.2-201ENST00000624018 1556 ntBASIC15.96■□□□□ 0.15
SSSCA1O60232 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SSSCA1O60232 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 CROCCP3-202ENST00000420820 1947 ntBASIC15.96■□□□□ 0.15
SSSCA1O60232 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.96■□□□□ 0.15
SSSCA1O60232 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.96■□□□□ 0.15
SSSCA1O60232 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.96■□□□□ 0.15
SSSCA1O60232 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.96■□□□□ 0.15
SSSCA1O60232 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.96■□□□□ 0.15
SSSCA1O60232 CDV3P1-201ENST00000471403 739 ntBASIC15.96■□□□□ 0.15
SSSCA1O60232 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.96■□□□□ 0.15
SSSCA1O60232 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 AF213884.3-201ENST00000563833 479 ntBASIC15.96■□□□□ 0.15
SSSCA1O60232 CCDC92B-201ENST00000575506 885 ntBASIC15.96■□□□□ 0.15
SSSCA1O60232 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.96■□□□□ 0.15
SSSCA1O60232 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SSSCA1O60232 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSSCA1O60232 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
SSSCA1O60232 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSSCA1O60232 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SSSCA1O60232 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.96■□□□□ 0.14
SSSCA1O60232 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSSCA1O60232 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.96■□□□□ 0.14
SSSCA1O60232 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.95■□□□□ 0.14
SSSCA1O60232 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 KRT16P6-202ENST00000425692 1426 ntBASIC15.95■□□□□ 0.14
SSSCA1O60232 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
SSSCA1O60232 IRS3P-201ENST00000223076 1006 ntBASIC15.95■□□□□ 0.14
SSSCA1O60232 EDA-201ENST00000338901 1233 ntBASIC15.95■□□□□ 0.14
SSSCA1O60232 AC097381.1-201ENST00000429019 1296 ntBASIC15.95■□□□□ 0.14
SSSCA1O60232 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.95■□□□□ 0.14
SSSCA1O60232 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.95■□□□□ 0.14
SSSCA1O60232 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSSCA1O60232 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SSSCA1O60232 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.95■□□□□ 0.14
SSSCA1O60232 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SSSCA1O60232 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
SSSCA1O60232 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSSCA1O60232 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SSSCA1O60232 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.94■□□□□ 0.14
SSSCA1O60232 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 AC087633.2-202ENST00000565166 1439 ntBASIC15.94■□□□□ 0.14
SSSCA1O60232 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SSSCA1O60232 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SSSCA1O60232 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSSCA1O60232 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.94■□□□□ 0.14
SSSCA1O60232 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms