Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC069544.1-201ENST00000609399 999 ntBASIC17.47■□□□□ 0.39
TRAF3IP2O43734 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 AP006587.1-201ENST00000534129 1502 ntBASIC17.47■□□□□ 0.39
TRAF3IP2O43734 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 YBX1P10-201ENST00000444752 975 ntBASIC17.46■□□□□ 0.39
TRAF3IP2O43734 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 AC233263.1-201ENST00000578059 224 ntBASIC17.46■□□□□ 0.39
TRAF3IP2O43734 MIR4651-201ENST00000582622 73 ntBASIC17.46■□□□□ 0.39
TRAF3IP2O43734 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF3IP2O43734 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAF3IP2O43734 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.46■□□□□ 0.38
TRAF3IP2O43734 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAF3IP2O43734 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.45■□□□□ 0.38
TRAF3IP2O43734 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF3IP2O43734 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 KRT17P3-201ENST00000420566 1262 ntBASIC17.44■□□□□ 0.38
TRAF3IP2O43734 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAF3IP2O43734 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAF3IP2O43734 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms