Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 Z99916.2-201ENST00000604037 246 ntBASIC19.93■□□□□ 0.78
KDELR3O43731 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.92■□□□□ 0.78
KDELR3O43731 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.92■□□□□ 0.78
KDELR3O43731 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 AL353807.1-201ENST00000427475 662 ntBASIC19.92■□□□□ 0.78
KDELR3O43731 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.92■□□□□ 0.78
KDELR3O43731 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.92■□□□□ 0.78
KDELR3O43731 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
KDELR3O43731 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KDELR3O43731 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
KDELR3O43731 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.91■□□□□ 0.78
KDELR3O43731 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.91■□□□□ 0.78
KDELR3O43731 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.91■□□□□ 0.78
KDELR3O43731 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.91■□□□□ 0.78
KDELR3O43731 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KDELR3O43731 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 AC012618.2-201ENST00000428058 849 ntBASIC19.91■□□□□ 0.78
KDELR3O43731 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.91■□□□□ 0.78
KDELR3O43731 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.91■□□□□ 0.78
KDELR3O43731 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.91■□□□□ 0.78
KDELR3O43731 AF186192.3-201ENST00000583427 947 ntBASIC19.91■□□□□ 0.78
KDELR3O43731 AC233702.5-201ENST00000584107 538 ntBASIC19.91■□□□□ 0.78
KDELR3O43731 AL353708.3-201ENST00000610272 989 ntBASIC19.91■□□□□ 0.78
KDELR3O43731 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KDELR3O43731 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.91■□□□□ 0.78
KDELR3O43731 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.9■□□□□ 0.78
KDELR3O43731 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 MIR718-201ENST00000390190 70 ntBASIC19.9■□□□□ 0.78
KDELR3O43731 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.9■□□□□ 0.78
KDELR3O43731 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
KDELR3O43731 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.9■□□□□ 0.78
KDELR3O43731 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.9■□□□□ 0.78
KDELR3O43731 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.9■□□□□ 0.78
KDELR3O43731 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.9■□□□□ 0.78
KDELR3O43731 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.9■□□□□ 0.78
KDELR3O43731 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
KDELR3O43731 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.9■□□□□ 0.78
KDELR3O43731 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 AC125437.2-201ENST00000625180 2167 ntBASIC19.9■□□□□ 0.78
KDELR3O43731 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.9■□□□□ 0.78
KDELR3O43731 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDELR3O43731 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KDELR3O43731 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.89■□□□□ 0.77
KDELR3O43731 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
KDELR3O43731 RPS2P4-201ENST00000476944 856 ntBASIC19.89■□□□□ 0.77
KDELR3O43731 AP002982.1-201ENST00000492365 877 ntBASIC19.89■□□□□ 0.77
KDELR3O43731 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.89■□□□□ 0.77
KDELR3O43731 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KDELR3O43731 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.89■□□□□ 0.77
KDELR3O43731 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDELR3O43731 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.88■□□□□ 0.77
KDELR3O43731 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.88■□□□□ 0.77
KDELR3O43731 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms