Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SEMA3EO15041 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SEMA3EO15041 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SEMA3EO15041 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SEMA3EO15041 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
SEMA3EO15041 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SEMA3EO15041 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.64■■□□□ 1.37
SEMA3EO15041 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.64■■□□□ 1.37
SEMA3EO15041 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.64■■□□□ 1.37
SEMA3EO15041 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.64■■□□□ 1.37
SEMA3EO15041 Z85996.1-201ENST00000494644 937 ntBASIC23.64■■□□□ 1.37
SEMA3EO15041 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.64■■□□□ 1.37
SEMA3EO15041 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SEMA3EO15041 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SEMA3EO15041 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.64■■□□□ 1.37
SEMA3EO15041 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.63■■□□□ 1.37
SEMA3EO15041 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.63■■□□□ 1.37
SEMA3EO15041 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.63■■□□□ 1.37
SEMA3EO15041 AC011298.2-201ENST00000617989 482 ntBASIC23.63■■□□□ 1.37
SEMA3EO15041 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SEMA3EO15041 LINC01568-207ENST00000641790 1380 ntBASIC23.63■■□□□ 1.37
SEMA3EO15041 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SEMA3EO15041 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SEMA3EO15041 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SEMA3EO15041 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SEMA3EO15041 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
SEMA3EO15041 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 RCN1P1-201ENST00000400413 996 ntBASIC23.62■■□□□ 1.37
SEMA3EO15041 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 AC097488.1-201ENST00000507834 756 ntBASIC23.62■■□□□ 1.37
SEMA3EO15041 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.62■■□□□ 1.37
SEMA3EO15041 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.62■■□□□ 1.37
SEMA3EO15041 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SEMA3EO15041 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.62■■□□□ 1.37
SEMA3EO15041 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.62■■□□□ 1.37
SEMA3EO15041 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.61■■□□□ 1.37
SEMA3EO15041 AC099778.1-201ENST00000568593 1911 ntBASIC23.61■■□□□ 1.37
SEMA3EO15041 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.61■■□□□ 1.37
SEMA3EO15041 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.61■■□□□ 1.37
SEMA3EO15041 AC008040.2-201ENST00000461049 708 ntBASIC23.61■■□□□ 1.37
SEMA3EO15041 KRT18P21-201ENST00000515767 1272 ntBASIC23.61■■□□□ 1.37
SEMA3EO15041 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.61■■□□□ 1.37
SEMA3EO15041 AL160286.2-201ENST00000567150 934 ntBASIC23.61■■□□□ 1.37
SEMA3EO15041 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.61■■□□□ 1.37
SEMA3EO15041 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SEMA3EO15041 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SEMA3EO15041 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SEMA3EO15041 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SEMA3EO15041 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SEMA3EO15041 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SEMA3EO15041 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SEMA3EO15041 KRT18P22-201ENST00000402024 1347 ntBASIC23.6■■□□□ 1.37
SEMA3EO15041 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
SEMA3EO15041 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SEMA3EO15041 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.6■■□□□ 1.37
SEMA3EO15041 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SEMA3EO15041 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SEMA3EO15041 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SEMA3EO15041 C2orf69P3-201ENST00000565542 1120 ntBASIC23.6■■□□□ 1.37
SEMA3EO15041 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SEMA3EO15041 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SEMA3EO15041 AC096733.2-201ENST00000609937 1394 ntBASIC23.6■■□□□ 1.37
SEMA3EO15041 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SEMA3EO15041 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.6■■□□□ 1.37
SEMA3EO15041 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SEMA3EO15041 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.59■■□□□ 1.37
SEMA3EO15041 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SEMA3EO15041 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.59■■□□□ 1.37
SEMA3EO15041 AC005363.2-201ENST00000618631 242 ntBASIC23.59■■□□□ 1.37
SEMA3EO15041 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.59■■□□□ 1.37
SEMA3EO15041 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SEMA3EO15041 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SEMA3EO15041 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SEMA3EO15041 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SEMA3EO15041 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SEMA3EO15041 AC092667.1-201ENST00000434301 2586 ntBASIC23.58■■□□□ 1.37
SEMA3EO15041 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
SEMA3EO15041 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SEMA3EO15041 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SEMA3EO15041 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SEMA3EO15041 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SEMA3EO15041 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SEMA3EO15041 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SEMA3EO15041 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
SEMA3EO15041 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms