Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.28■■□□□ 1.64
CHL1O00533 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHL1O00533 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHL1O00533 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHL1O00533 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHL1O00533 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.27■■□□□ 1.64
CHL1O00533 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
CHL1O00533 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.27■■□□□ 1.64
CHL1O00533 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.27■■□□□ 1.64
CHL1O00533 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.27■■□□□ 1.64
CHL1O00533 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.27■■□□□ 1.64
CHL1O00533 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CHL1O00533 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.27■■□□□ 1.64
CHL1O00533 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.27■■□□□ 1.64
CHL1O00533 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
CHL1O00533 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHL1O00533 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.27■■□□□ 1.64
CHL1O00533 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC25.26■■□□□ 1.63
CHL1O00533 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHL1O00533 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.26■■□□□ 1.63
CHL1O00533 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.26■■□□□ 1.63
CHL1O00533 AL031985.4-201ENST00000642138 673 ntBASIC25.26■■□□□ 1.63
CHL1O00533 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.26■■□□□ 1.63
CHL1O00533 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHL1O00533 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.26■■□□□ 1.63
CHL1O00533 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.25■■□□□ 1.63
CHL1O00533 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.25■■□□□ 1.63
CHL1O00533 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.25■■□□□ 1.63
CHL1O00533 BX088651.1-201ENST00000540551 451 ntBASIC25.25■■□□□ 1.63
CHL1O00533 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.25■■□□□ 1.63
CHL1O00533 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.25■■□□□ 1.63
CHL1O00533 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.25■■□□□ 1.63
CHL1O00533 AC026271.3-201ENST00000571884 352 ntBASIC25.25■■□□□ 1.63
CHL1O00533 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.25■■□□□ 1.63
CHL1O00533 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CHL1O00533 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.25■■□□□ 1.63
CHL1O00533 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHL1O00533 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CHL1O00533 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.24■■□□□ 1.63
CHL1O00533 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CHL1O00533 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CHL1O00533 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CHL1O00533 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.24■■□□□ 1.63
CHL1O00533 AC011506.1-201ENST00000474329 610 ntBASIC25.24■■□□□ 1.63
CHL1O00533 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.24■■□□□ 1.63
CHL1O00533 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.24■■□□□ 1.63
CHL1O00533 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.24■■□□□ 1.63
CHL1O00533 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 AC125437.2-201ENST00000625180 2167 ntBASIC25.24■■□□□ 1.63
CHL1O00533 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC25.24■■□□□ 1.63
CHL1O00533 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHL1O00533 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHL1O00533 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHL1O00533 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CHL1O00533 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.23■■□□□ 1.63
CHL1O00533 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHL1O00533 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CHL1O00533 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHL1O00533 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.23■■□□□ 1.63
CHL1O00533 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHL1O00533 RBM17P1-201ENST00000453646 1190 ntBASIC25.23■■□□□ 1.63
CHL1O00533 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.23■■□□□ 1.63
CHL1O00533 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.23■■□□□ 1.63
CHL1O00533 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.23■■□□□ 1.63
CHL1O00533 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.23■■□□□ 1.63
CHL1O00533 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.23■■□□□ 1.63
CHL1O00533 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.23■■□□□ 1.63
CHL1O00533 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms