Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMEM179-206ENST00000616017 1645 ntBASIC22.08■■□□□ 1.13
DDX39AO00148 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
DDX39AO00148 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
DDX39AO00148 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.08■■□□□ 1.12
DDX39AO00148 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX39AO00148 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
DDX39AO00148 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
DDX39AO00148 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX39AO00148 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
DDX39AO00148 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX39AO00148 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX39AO00148 CR392000.1-201ENST00000624770 1228 ntBASIC22.07■■□□□ 1.12
DDX39AO00148 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.07■■□□□ 1.12
DDX39AO00148 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
DDX39AO00148 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.07■■□□□ 1.12
DDX39AO00148 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX39AO00148 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
DDX39AO00148 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX39AO00148 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX39AO00148 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
DDX39AO00148 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.06■■□□□ 1.12
DDX39AO00148 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 MIR4785-201ENST00000585005 73 ntBASIC22.06■■□□□ 1.12
DDX39AO00148 AC026471.5-201ENST00000615068 467 ntBASIC22.06■■□□□ 1.12
DDX39AO00148 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.06■■□□□ 1.12
DDX39AO00148 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX39AO00148 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX39AO00148 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX39AO00148 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
DDX39AO00148 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.05■■□□□ 1.12
DDX39AO00148 NIFKP9-201ENST00000419265 221 ntBASIC22.05■■□□□ 1.12
DDX39AO00148 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.05■■□□□ 1.12
DDX39AO00148 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX39AO00148 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX39AO00148 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX39AO00148 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX39AO00148 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX39AO00148 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.04■■□□□ 1.12
DDX39AO00148 AL355075.4-201ENST00000554988 638 ntBASIC22.04■■□□□ 1.12
DDX39AO00148 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.04■■□□□ 1.12
DDX39AO00148 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.04■■□□□ 1.12
DDX39AO00148 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX39AO00148 KRT17P2-201ENST00000300992 1314 ntBASIC22.04■■□□□ 1.12
DDX39AO00148 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX39AO00148 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DDX39AO00148 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
DDX39AO00148 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
DDX39AO00148 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX39AO00148 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 AL355355.2-201ENST00000442321 338 ntBASIC22.03■■□□□ 1.12
DDX39AO00148 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
DDX39AO00148 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX39AO00148 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX39AO00148 AL353708.3-201ENST00000610272 989 ntBASIC22.03■■□□□ 1.12
DDX39AO00148 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX39AO00148 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
DDX39AO00148 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX39AO00148 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX39AO00148 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
DDX39AO00148 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms