Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 BX664615.1-201ENST00000443558 458 ntBASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AP003041.3-201ENST00000527151 707 ntBASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AL160286.2-201ENST00000567150 934 ntBASIC22.53■■□□□ 1.2
LOC285556D6RIA3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AC091076.1-201ENST00000610741 619 ntBASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AC116407.4-201ENST00000623319 1061 ntBASIC22.53■■□□□ 1.2
LOC285556D6RIA3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
LOC285556D6RIA3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC285556D6RIA3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.51■■□□□ 1.19
LOC285556D6RIA3 AC009947.2-201ENST00000444014 672 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AL121956.5-201ENST00000625261 221 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AC005332.1-201ENST00000577698 1310 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AC092647.4-201ENST00000457211 535 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AL353719.1-201ENST00000566847 864 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 AL023973.1-201ENST00000624619 620 ntBASIC22.5■■□□□ 1.19
LOC285556D6RIA3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LOC285556D6RIA3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 TSPY5P-201ENST00000426936 936 ntBASIC22.49■■□□□ 1.19
LOC285556D6RIA3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 DUSP5P1-201ENST00000441325 1139 ntBASIC22.49■■□□□ 1.19
LOC285556D6RIA3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC285556D6RIA3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.48■■□□□ 1.19
LOC285556D6RIA3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
LOC285556D6RIA3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.48■■□□□ 1.19
LOC285556D6RIA3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LOC285556D6RIA3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.48■■□□□ 1.19
LOC285556D6RIA3 AL441883.1-201ENST00000566170 1045 ntBASIC22.48■■□□□ 1.19
LOC285556D6RIA3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms