Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 MIR132-201ENST00000591554 101 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 DUXAP10-204ENST00000612052 616 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AL136228.1-201ENST00000622221 319 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 AC093775.1-201ENST00000624154 1868 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A3BPQ9Y5P4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL4A3BPQ9Y5P4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RNA5SP273-201ENST00000362484 113 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RNU5B-1-201ENST00000363286 116 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RNU6-932P-201ENST00000391108 106 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 HMGN1P20-201ENST00000411849 300 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RPS26P38-201ENST00000414476 348 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC004854.1-201ENST00000440356 349 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC092865.4-201ENST00000477936 615 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC083795.1-201ENST00000491760 320 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 CCDC11P1-201ENST00000503137 1162 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 UBE2V1P12-201ENST00000503954 474 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC006499.4-201ENST00000510947 694 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 POLR2KP1-201ENST00000553226 168 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RPAP2P1-201ENST00000603626 1168 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 STMN1P1-201ENST00000617809 440 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 AL357562.1-201ENST00000624911 609 ntBASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A3BPQ9Y5P4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC022164.1-201ENST00000568767 2673 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LYPLA1P3-201ENST00000402650 695 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AL390879.1-201ENST00000439143 386 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC000041.1-201ENST00000439655 175 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC092170.1-201ENST00000440211 356 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 SEPT14P24-201ENST00000447236 180 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AL445466.1-201ENST00000448432 357 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AL162739.1-201ENST00000450606 307 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC110749.1-201ENST00000462007 357 ntBASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A3BPQ9Y5P4 AC147055.3-201ENST00000510547 851 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms