Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 GPN2-201ENST00000374133 715 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-769P-201ENST00000384407 104 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC096664.1-201ENST00000393996 778 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AL360271.1-201ENST00000395679 510 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 TMSB4XP8-201ENST00000402089 135 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 TMSB4XP6-201ENST00000415187 135 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 METTL15P3-201ENST00000415522 1221 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 TMSB4XP1-201ENST00000424567 135 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 ACTBP12-201ENST00000435871 418 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC098828.1-201ENST00000436164 440 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC002504.1-201ENST00000438281 691 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AL359711.1-201ENST00000441999 123 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 RPL7P22-201ENST00000466005 733 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC009269.1-202ENST00000484381 469 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 RPL39P5-202ENST00000512505 151 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.721-201ENST00000517207 102 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 SERPINA15P-201ENST00000529287 266 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC023310.2-201ENST00000553844 547 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 RBM22P6-201ENST00000611682 867 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 7SK.12-201ENST00000612820 244 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AL096712.1-201ENST00000614561 159 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 RN7SL301P-202ENST00000618767 298 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AL731566.2-201ENST00000618971 317 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC007546.1-201ENST00000619452 559 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 RPL23AP61-201ENST00000623642 466 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AL109806.1-201ENST00000623967 1248 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 PNPT1P2-201ENST00000456768 2050 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 LINC00294-201ENST00000631190 3306 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 AC011379.1-201ENST00000508713 3025 ntBASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
VPS9D1Q9Y2B5 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC110926.1-201ENST00000412499 2825 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL139811.2-201ENST00000373465 1630 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 PARP1P1-201ENST00000413631 3026 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.180-201ENST00000363867 113 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-619P-201ENST00000365146 108 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RN7SKP47-201ENST00000365347 328 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-1040P-201ENST00000383974 107 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 MIR320C1-201ENST00000408566 88 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL807761.1-201ENST00000417622 171 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SLC35E1P1-201ENST00000419313 864 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC114760.1-201ENST00000420310 652 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RPSAP62-201ENST00000432596 833 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RPS15AP9-201ENST00000439856 381 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms