Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 SMG1P7-201ENST00000565246 2704 ntBASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.01□□□□□ -1.29
NPC1L1Q9UHC9 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AL590762.4-201ENST00000425885 253 ntBASIC7□□□□□ -1.29
NPC1L1Q9UHC9 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 AL121612.2-201ENST00000612261 482 ntBASIC7□□□□□ -1.29
NPC1L1Q9UHC9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7□□□□□ -1.29
NPC1L1Q9UHC9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7□□□□□ -1.29
NPC1L1Q9UHC9 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC239868.2-201ENST00000564237 4527 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC114947.2-201ENST00000565748 2125 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 MIR550A3-201ENST00000390735 95 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AL078599.1-201ENST00000402075 293 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 RN7SKP16-201ENST00000410180 299 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 HYALP1-201ENST00000417674 1279 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 BX323845.1-201ENST00000432417 179 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 RPS29P9-201ENST00000440360 171 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 RPL35AP28-201ENST00000459730 331 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 RPL7AP6-201ENST00000477943 801 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC020779.1-201ENST00000478757 796 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 RPSAP50-201ENST00000481955 852 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC147055.3-201ENST00000510547 851 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC091932.2-201ENST00000623014 291 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 THAP12P4-201ENST00000528321 2266 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 AP001029.2-203ENST00000589795 4910 ntBASIC6.99□□□□□ -1.29
NPC1L1Q9UHC9 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 RPL23P2-201ENST00000320371 421 ntBASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 RN7SKP114-201ENST00000410327 279 ntBASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 RN7SKP213-201ENST00000410746 298 ntBASIC6.98□□□□□ -1.29
NPC1L1Q9UHC9 RHOT1P3-201ENST00000436571 331 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms