Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 MIR3189-201ENST00000578735 73 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 RN7SL230P-201ENST00000580835 303 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AP001542.2-201ENST00000593141 364 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC004890.3-201ENST00000605566 1095 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC108865.2-201ENST00000606881 432 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC068726.1-201ENST00000610993 341 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC021106.3-201ENST00000623925 531 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AP003399.1-201ENST00000637534 361 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC010401.2-201ENST00000575137 4934 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AC027575.3-201ENST00000583058 2747 ntBASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCM2LQ9NUG4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RLIMP2-201ENST00000427891 1563 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RNA5SP435-201ENST00000364044 108 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RNU11-201ENST00000387069 134 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RN7SKP222-201ENST00000410651 315 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RNU2-22P-201ENST00000411266 212 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC097359.1-201ENST00000447946 463 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RNU7-27P-201ENST00000459281 62 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC110749.1-201ENST00000462007 357 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RPL7P40-201ENST00000481703 745 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC091544.1-201ENST00000484702 348 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RPL5P23-201ENST00000496040 868 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC082651.2-201ENST00000496833 166 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC093890.1-201ENST00000502554 540 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC008945.1-201ENST00000505144 499 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RNA5SP318-201ENST00000516352 92 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 snoZ278.1-201ENST00000517059 112 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 ANP32BP1-202ENST00000568553 737 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 VN1R83P-201ENST00000595685 445 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AL360012.1-201ENST00000602813 131 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC024257.5-201ENST00000612739 531 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AL162574.1-201ENST00000615702 950 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 MIR6729-201ENST00000618194 65 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC089999.3-201ENST00000622440 577 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC006328.2-201ENST00000623198 397 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms